| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_01561 |
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| Symbol | rpaA |
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| ID | 4720292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 142690 |
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| End bp | 143472 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640079819 |
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| Product | two-component response regulator |
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| Protein accession | YP_001010472 |
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| Protein GI | 123965391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.22181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT CAATCCTTTT GATAGAAGAC GATCGTGATA TGCGTGAATT AGTAGCTGGA
CATCTCGAGC ATTCCGGTTT TGATGTGCAA AAAGCTGAAG ATGGTATAAA AGGTCAAGCT
TTAGCACTAC AGTATTCACC TGACCTAATT CTTTTGGATC TAATGTTACC CAGTGTTGAT
GGCTTAACAC TATGTCAAAG GTTAAGGAGG GATGAGAGAA CATCAAATAT TCCGATCTTA
ATGATTACAG CCTTGGGCGG GCTAAAAGAT AAAGTAACTG GATTTAATTC AGGTGCTGAT
GATTACATAA CAAAACCATT TGATCTTGAA GAATTACATG TCCGCATCAA AGCATTATTA
AGAAGAACTA ATAGAGCTCA ATTGAATTCA ACAAATCAAC AAGAAATTTT AAATTACGGT
CCTCTTACTC TTGTCCCAGA AAGATTTGAG GCTATTTGGT TTGAATCACC TGTAAGACTT
ACGCATTTAG AATTTGAACT GCTACATTGC TTGTTACAAA GGCATGGTCA AACAGTTTCA
CCGGCACTTA TTTTAAAAGA AGTCTGGGGT TATGAGCCAG ATGATGATAT AGAGACAATT
CGGGTTCATG TAAGACACTT AAGAACAAAA TTAGAACCTG ATCCTCGCAA GCCAACATAT
ATTAAAACTG TTTACGGAGC AGGATATTGC CTTGAATTAC CTGATGAAGC AAAAGTTGAC
GTTGCAAGTC AAAAATTTAC AGAATCTAGA AATTCAAGTT TAATTAATAC AGTGATTGAG
TAA
|
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| Protein sequence | MKISILLIED DRDMRELVAG HLEHSGFDVQ KAEDGIKGQA LALQYSPDLI LLDLMLPSVD
GLTLCQRLRR DERTSNIPIL MITALGGLKD KVTGFNSGAD DYITKPFDLE ELHVRIKALL
RRTNRAQLNS TNQQEILNYG PLTLVPERFE AIWFESPVRL THLEFELLHC LLQRHGQTVS
PALILKEVWG YEPDDDIETI RVHVRHLRTK LEPDPRKPTY IKTVYGAGYC LELPDEAKVD
VASQKFTESR NSSLINTVIE
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