Gene P9515_00341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00341 
SymboldhsS 
ID4719865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp32651 
End bp33814 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content34% 
IMG OID640079695 
Productsoluble hydrogenase small subunit 
Protein accessionYP_001010350 
Protein GI123965269 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATAC AACAAAAATT ATCATTGATG ATACCTGGTC CCACACCAGT TCCAGAAAAA 
GTTTTAGAAG CACTTGGAAG ACATCCCATA GGGCACAGAA GCAAAGATTT TCAAGATCTT
GTTGAAATTA CAACCAAGAA TCTACAATGG TTACACCAAA CAAAAAATGA TGTTTTAACA
ATAACTGGTA GTGGAACTGC TGCTATGGAA GCAGGAATAA TCAGTACATT GAGCAAAGGA
GACAAAGTTA TCTGTGGCGA GAACGGGAAA TTCGGACAAA GATGGGTAAA AGTTGCGCAA
GAATTTGGAC TAGAAGTAAT TAAAATTGAT GCAAAATGGG GGAGCCCTCT TGATCCAGAA
AATTTCAAAA AGATTTTAGA GAAAGATTAT AAAAAAGAAA TAAAAGCAGT TATCCTCACA
CATTCAGAAA CCTCAACAGG AGTAATTAAT GATTTAAAAA CGATAAGTTC GCATATTCGT
AATCATAAAA AAGCTTTATC AATTATTGAC TGCGTAACAA GTATTGGAGC TTGTGACGTT
CCTGTAGATG AGTGGGAGCT AGATATTGTT GCCTCAGGAT CTCAAAAAGG ATACATGATA
CCTCCAGGCT TAAGCTTTGT GTCTATGAGT CAAAAAGCAT GGAAAGCTTC AGAAGCATCT
AATTTACCAA AGTTTTATTT AAATTTAAAA TCATATAAAA AAAGTCTTTC AAGTAATAGC
AATCCCTATA CTCCAGCAGT TAACTTAGTT TTTGCCTTAA ATGAAGCTTT AAACATGATG
AAAGATGAAG GATTAGATTC AATTTTCGCG AGGCATAAAA AACATAGATT AGCTGTTAGT
GAGGCAGCTA AAACTCTAAA TCTCCAATTA TTTGCTGATG AGAACCATTT GAGTCCTTCA
GTAACTGCAA TACAAATAAA AGATATAGAT GCAGAACAAT TTAGAAAAAC AATAAAAACT
AAATATGATA TTTTGCTAGC TGGAGGGCAA GATCATTTAA AAGGTAAAAT CTTTAGGGTG
GGTCATCTAG GTTATATCAA CGATCGAGAC GTAATTTCAG TGATAGCAGC AATAGGAAAT
ACATTGGTAG AACTAAATAA AATTTCTACC GAACAAGTCG GTGAAGCATT AAAAATAGCT
TCATTTCATC TAAAAGTAAC GTAA
 
Protein sequence
MAIQQKLSLM IPGPTPVPEK VLEALGRHPI GHRSKDFQDL VEITTKNLQW LHQTKNDVLT 
ITGSGTAAME AGIISTLSKG DKVICGENGK FGQRWVKVAQ EFGLEVIKID AKWGSPLDPE
NFKKILEKDY KKEIKAVILT HSETSTGVIN DLKTISSHIR NHKKALSIID CVTSIGACDV
PVDEWELDIV ASGSQKGYMI PPGLSFVSMS QKAWKASEAS NLPKFYLNLK SYKKSLSSNS
NPYTPAVNLV FALNEALNMM KDEGLDSIFA RHKKHRLAVS EAAKTLNLQL FADENHLSPS
VTAIQIKDID AEQFRKTIKT KYDILLAGGQ DHLKGKIFRV GHLGYINDRD VISVIAAIGN
TLVELNKIST EQVGEALKIA SFHLKVT