Gene P9515_00241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00241 
Symbol 
ID4719855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp26151 
End bp27242 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content33% 
IMG OID640079685 
Productcyclophilin-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001010340 
Protein GI123965259 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACT TCTTATCAAA TCAGAACAAA CGTTATTTAC TTTTATTTTT AATTTTAATT 
CAAGTTTGCT TCTTAAAACC AACGCAAGTA TTAGCTGATT TACCTACTGG AAACGCAGTA
AAAGATCCCA ATGCAATACT AAGAAATGCC CTTCCTATAA AGCAAGTTGA GCTACAAGAA
ATTCAACATA AGTTAGAAGA TACAAGCGAC CTTGTAAGAG GAGGAAGATG GCCAGCCCTC
TCAAAAACTG TTACAAAATG TCAATCTTTA CTAAAAAAAT ATAAGAATCG AATTATTGAG
GAATTGCCAA TTGAAAAACA AAAAAGTGTA GAAAAGACTT TTTTAGATCT TAAAAATGAT
TTTGATAATC TTCAAGATCA AGCCAAATCC AAAGATAAAT ATTCATTTAT CACAACCAGA
AAAGAAGCAT TAGAAAAAAT AGGGGGAATT GAGGAATATT TTTTACCAAA TGAGTTTCCA
TACTCTATTC CAAGTGAATT TGACGATCTT CCGAGATTAC TTGGTAGAGC AAAAGTCAAA
ATAAAAACTT CTAAGGGTGA TATGCAAGCA ATAATAGATG GATTTAATGC ACCTCTTACT
GCTGGTGCAT TTATAGATTT ATCTTCAAAA AACTTTTACA GTAATCTACC AATTAATAGG
GCAGAAGAAT TTTTTGTTCT TCAAACTGGT GATCCAGTTG GTAATGAGAT TGGATACGTA
GATCCTGAAA CCAATTTGGA GAGACATGTC CCACTAGAGA TAAGAATACC CGACGAAAGC
GAAACTTTTT ATAATGAAAC ATTCGAAGAG TTGGGCCTTT ATACAGAAAC GCCAACTTTG
CCATTTGCAA CACTGGGAAC CTTAGGGTGG TCCCACTCTA GTACATCTGT TAATGATGGA
TCATCTCAGT TTTTCTTCTT TTTATATGAA GCAGAACTTA ATCCAGCTGG TCGTAATCTA
ATTGATGGAA GGAATGCTGC ATTTGGTTAT GTAATTGAGG GCTCTGAAGT TTTAGAAGAA
CTAACAAAAG ACGACACAAT CATCTCAATT GATGTTTTAA GTGGAATGGA TAAACTGAAA
TTAAATGCAT AA
 
Protein sequence
MQNFLSNQNK RYLLLFLILI QVCFLKPTQV LADLPTGNAV KDPNAILRNA LPIKQVELQE 
IQHKLEDTSD LVRGGRWPAL SKTVTKCQSL LKKYKNRIIE ELPIEKQKSV EKTFLDLKND
FDNLQDQAKS KDKYSFITTR KEALEKIGGI EEYFLPNEFP YSIPSEFDDL PRLLGRAKVK
IKTSKGDMQA IIDGFNAPLT AGAFIDLSSK NFYSNLPINR AEEFFVLQTG DPVGNEIGYV
DPETNLERHV PLEIRIPDES ETFYNETFEE LGLYTETPTL PFATLGTLGW SHSSTSVNDG
SSQFFFFLYE AELNPAGRNL IDGRNAAFGY VIEGSEVLEE LTKDDTIISI DVLSGMDKLK
LNA