Gene P9515_00001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00001 
SymboldnaN 
ID4720479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp171 
End bp1328 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content30% 
IMG OID640079661 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001010316 
Protein GI123965235 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.354313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTG TTTGCAATCA AAATGAATTT AATTATGCAA TTCAATTAGT TAGTAAGGCA 
GTTTCCTCAA GACCCACTCA TCCAATTCTT GCAAACTTAC TTCTGACAGC TGATCAAGGA
ACTAACAAAA TTAGTTTAAC TGGATTTGAT TTAAATTTAG GAATACAAAC TTCATTTGAT
GCGACTGTCA AAAAAAGCGG CGCAATTACT ATTCCCTCAA AACTTTTAGC TGAAATTGTT
AATAAGTTAC CAAGTGAAAC TCCTGTTTCT CTTGATGTCG ATGATAGCTC TGATAATATT
TTAATCAAAA GTGATAGGGG TTCTTTTAAC ATAAAAGGTA TTCCATCAGA CGATTATCCA
AATTTACCTT TTGTAGAAAG TGGGACATCT TTGAATATCG ATCCAAGTTC TTTTTTAAAA
GCTTTAAAGT TAACTATATT TGCTAGTAGT AGTGATGATT CCAAACAATT ACTCACTGGT
GTTAATTTTA CATTTAATTT GAAATTTCTT GAGTCAGCTG CAACAGATGG CCATAGATTA
GCAGTTGTTT TAGTTGACAA AAAAGAAAAT TTTGATGAAG TAGCAGATCT TTCTTCTAAT
GAAGATAACT TATCAGTAAC TATACCAACA AGATCTTTAA GAGAAATTGA AAAGCTTGTT
AGTCTCAGAA CTTCAGAAAA TTCAATTAAG CTTTTTTATG ATAAAGGTCA AGTTGTATTT
ATTTCTTCTA ATCAAATAAT TACTACAAGA ACTCTTGAAG GTTCTTATCC AAATTATTCT
CAATTAATAC CGGATGATTT CTCTAAACTT TTTACATTTA ATACAAAAAT ATTAATTGAT
TCTCTCGAAA GAATAGCTGT ATTAGCCGAT CAACAAAGTA GTGTTGTTAA AATTAAATTA
GAAGAAAAGG GTTTGGCATT AATAAGTGCT GATGCTCAAG ATATAGGCAA TGCAAGTGAA
ATAGTTCCAG TATCCTATGA TTTCGATCAG TTTGATATCG CTTTTAATGT AAGGTATCTC
TTAGAAGGTC TAAAAGTTAT TTCAAGTGAA AATGTTCTTT TTAAATGTAA TCTTTCTACT
ACTCCTGCTG TTTTAGTACC AGAAGATAAT ATTAGTTCTT TTACTTATTT AGTTATGCCT
GTTCAAGTTC GTTCCTAA
 
Protein sequence
MEIVCNQNEF NYAIQLVSKA VSSRPTHPIL ANLLLTADQG TNKISLTGFD LNLGIQTSFD 
ATVKKSGAIT IPSKLLAEIV NKLPSETPVS LDVDDSSDNI LIKSDRGSFN IKGIPSDDYP
NLPFVESGTS LNIDPSSFLK ALKLTIFASS SDDSKQLLTG VNFTFNLKFL ESAATDGHRL
AVVLVDKKEN FDEVADLSSN EDNLSVTIPT RSLREIEKLV SLRTSENSIK LFYDKGQVVF
ISSNQIITTR TLEGSYPNYS QLIPDDFSKL FTFNTKILID SLERIAVLAD QQSSVVKIKL
EEKGLALISA DAQDIGNASE IVPVSYDFDQ FDIAFNVRYL LEGLKVISSE NVLFKCNLST
TPAVLVPEDN ISSFTYLVMP VQVRS