Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_17651 |
Symbol | rplC |
ID | 4718497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1497851 |
End bp | 1498504 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640079493 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001010155 |
Protein GI | 123969297 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.884364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTG GAATTTTAGG AAAGAAATTG GGCATGTCCC AACTTTTCGA TGATAAAGGT AATTCGGTAC CAGTTACTCT TATAGAGGCT GGTCCTTGCC GCGTCACTCA ATTGAAAACA ACTGCTTTGG ATGGTTATAC CGCTGTTCAG ATAGGTTATG GCTTGTCCAA AGAGAAGCAT TTAAGCAAAC CTGAAAAGGG ACACTTATTG AAATCAGGTG AAGAACTTTT AAAGCATTTG AAAGAATATA GGGTTGAAGA AACTTCATCT TATGAAATCG GAAAACAAAT AACTGTAAAA AACTTTGAGG TTGGTCAAAA AGTTGATATC AGTGGCAAAT CTATGGGTAG AGGTTTTGCA GGTTACCAGA AAAGACATGG TTTTAGCAGA GGTCCTATGA GTCATGGTTC AAAAAATCAT AGAGCACCTG GATCTACAGG AGCAGGAACA ACTCCAGGCA GAATTTATCC TGGAAAAAGA ATGGCAGGAA GATATGGAGG AAAACAGATT ACTACTAAAG GTTTGTTAGT TCTAAAAATT GATGATCAGA AAAATTTGCT TGTAGTAAAG GGTTCTGTCC CAGGTAAGCC AGGCTCAATA ATAAACATTA AGCCAAATAA TGTCGTAGGC AAAAAAGGAG GTGAAAAATC ATGA
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Protein sequence | MSIGILGKKL GMSQLFDDKG NSVPVTLIEA GPCRVTQLKT TALDGYTAVQ IGYGLSKEKH LSKPEKGHLL KSGEELLKHL KEYRVEETSS YEIGKQITVK NFEVGQKVDI SGKSMGRGFA GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKQI TTKGLLVLKI DDQKNLLVVK GSVPGKPGSI INIKPNNVVG KKGGEKS
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