Gene A9601_17651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_17651 
SymbolrplC 
ID4718497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1497851 
End bp1498504 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content37% 
IMG OID640079493 
Product50S ribosomal protein L3 
Protein accessionYP_001010155 
Protein GI123969297 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.884364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTG GAATTTTAGG AAAGAAATTG GGCATGTCCC AACTTTTCGA TGATAAAGGT 
AATTCGGTAC CAGTTACTCT TATAGAGGCT GGTCCTTGCC GCGTCACTCA ATTGAAAACA
ACTGCTTTGG ATGGTTATAC CGCTGTTCAG ATAGGTTATG GCTTGTCCAA AGAGAAGCAT
TTAAGCAAAC CTGAAAAGGG ACACTTATTG AAATCAGGTG AAGAACTTTT AAAGCATTTG
AAAGAATATA GGGTTGAAGA AACTTCATCT TATGAAATCG GAAAACAAAT AACTGTAAAA
AACTTTGAGG TTGGTCAAAA AGTTGATATC AGTGGCAAAT CTATGGGTAG AGGTTTTGCA
GGTTACCAGA AAAGACATGG TTTTAGCAGA GGTCCTATGA GTCATGGTTC AAAAAATCAT
AGAGCACCTG GATCTACAGG AGCAGGAACA ACTCCAGGCA GAATTTATCC TGGAAAAAGA
ATGGCAGGAA GATATGGAGG AAAACAGATT ACTACTAAAG GTTTGTTAGT TCTAAAAATT
GATGATCAGA AAAATTTGCT TGTAGTAAAG GGTTCTGTCC CAGGTAAGCC AGGCTCAATA
ATAAACATTA AGCCAAATAA TGTCGTAGGC AAAAAAGGAG GTGAAAAATC ATGA
 
Protein sequence
MSIGILGKKL GMSQLFDDKG NSVPVTLIEA GPCRVTQLKT TALDGYTAVQ IGYGLSKEKH 
LSKPEKGHLL KSGEELLKHL KEYRVEETSS YEIGKQITVK NFEVGQKVDI SGKSMGRGFA
GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKQI TTKGLLVLKI
DDQKNLLVVK GSVPGKPGSI INIKPNNVVG KKGGEKS