Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_16681 |
Symbol | fumC |
ID | 4718398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1409186 |
End bp | 1410571 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640079394 |
Product | fumarate hydratase |
Protein accession | YP_001010058 |
Protein GI | 123969200 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.120243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAAA ATTTTAGGAT TGAAAAAGAT AGTATGGGAA CAATAGAGGT TCCCATGGAA GCTTTGTGGG GTGCCCAAAC ACAAAGATCG ATAATAAATT TTTCTATTGG AGAAGAATTA ATTCCAATTG AGTTAATTTA TTCACTGACC CTCATAAAAA AAGCTGCTTC AATTGCGAAT TTCAATTTAG GTTTAATAGA TAAAAGGAAA AAAGATTTGA TTGTAGAGGC ATGTACGGAA ATACTTGATG GGCTTCACGA TTCACAGTTT CCCTTAAAGG TTTGGCAAAC AGGTAGTGGT ACGCAAACAA ATATGAATGT TAATGAAGTA ATTTCAAATA TTGCAGCTTT AAAAACTAAT TCAGAGCTTG GTAGTCATCA ACCAATTCAT CCGAATGATG ATGTAAATAA ATCTCAGTCA ACTAATGACA CTTTTCCTGC TGCTATTCAA ATATCTGTTG TTAATGAAAT AATCAAAAAT CTAGTTCCAA CGATCAGAGA ACTTACTAAG GTCTTTGATA AAAAAAGTGA AGAATGGAAA GACCTTATAA AGATAGGAAG AACCCATTTT CAAGATGCAG TTCCCCTTAC TTTTGGGCAA GAAATATCAG GATGGTCAGA GCAACTTAAA GATGCTGAGA ATGCAATTAT TATGAGTCTG AATGAATTGT ATTTCTTACC TCTGGGAGGA ACTGCGGTTG GTACAGGGAT TAATTGTCCA AAAGGATTTT GTGAAGAGTC TATAAAATCA ATTTCCGATG ATACTAATTT AATGTTCTAT AAATCAAAAA ATAATTTTTC TATCATGGCC TCGCATGATC GTCTTGCTCA AGTAATGAGT CAGATAAAAA TATTAGCAAG TGCATTATTT AAAATTTCAA ATGACATAAA AATTCTATCT TCTGGTCCAA GATCAGGAAT ATATGAACTG ATTATTCCTC AAAATGAACC TGGAAGTTCT ATTATGCCAG GGAAAGTGAA TCCAACTCAA TGCGAAGCAT TATCAATGGT TTGTACTCAG ATAATGGGTC TTGAATATGC AGTCTCAATG GCAAATTCTA GCGGCACTTT ACAGATGAAT GAATATAAGC CTCTTATTGG ATTTAATATT CTCACAAGTT TAAAATTACT TAAAAATGTA ATAGAAAACT TCAGAAAAAA ATTAGTTGAT GGTATGCAAC CTAATCAAAA GAAAATGAAG TTAAATTTAG AAAATTCACT AATGTTGGTT ACAGCCATAG TGCCAAAAGT TGGTTATGAA AAAGCAGCTG AAATTGCAAA CCTTGCCTTC AAAGAATCAT TAAATTTAAA AGAGGCAACA ATTAAATTAG GTTATTTAAA CGAAGATGAA TTTGATGAAG CAATGAATAT CAATTCAATG ATTTGA
|
Protein sequence | MTKNFRIEKD SMGTIEVPME ALWGAQTQRS IINFSIGEEL IPIELIYSLT LIKKAASIAN FNLGLIDKRK KDLIVEACTE ILDGLHDSQF PLKVWQTGSG TQTNMNVNEV ISNIAALKTN SELGSHQPIH PNDDVNKSQS TNDTFPAAIQ ISVVNEIIKN LVPTIRELTK VFDKKSEEWK DLIKIGRTHF QDAVPLTFGQ EISGWSEQLK DAENAIIMSL NELYFLPLGG TAVGTGINCP KGFCEESIKS ISDDTNLMFY KSKNNFSIMA SHDRLAQVMS QIKILASALF KISNDIKILS SGPRSGIYEL IIPQNEPGSS IMPGKVNPTQ CEALSMVCTQ IMGLEYAVSM ANSSGTLQMN EYKPLIGFNI LTSLKLLKNV IENFRKKLVD GMQPNQKKMK LNLENSLMLV TAIVPKVGYE KAAEIANLAF KESLNLKEAT IKLGYLNEDE FDEAMNINSM I
|
| |