Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_16611 |
Symbol | ccdA |
ID | 4718391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1403598 |
End bp | 1404254 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640079387 |
Product | putative c-type cytochrome biogenesis protein CcdA |
Protein accession | YP_001010051 |
Protein GI | 123969193 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0785] Cytochrome c biogenesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.213566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAATG GCATTAATAA TCCTGGCCCA TTTACTATAT TTTTGATTTT CAGCGCAGGA CTTTTAACGA GTCTTGGTCC ATGCTCATTA TCATTACTAC CAATCACTAT TGCTTATATA GGAGGAACAG AGAAAAAACA ATTTAAACTT ATTAGTTTTT CAGGAGGAGT CGTTTTTTCC CTCGTTGCAC TTGGTGCTGC CAGTGGATTA TTAGGTAGGA TATATGGGCA AATCCCATCT TATTACACTT CGATTGTTGC CTTGATAGCA ATAATAATGG GTTTGAATTT ACTAGGAATT TTAAAGTTTC AGTTCCCGAA TGGACCTGAT CTACAAAAAA TAGAGGATAA GATACCATCC CTCATGGCAC CTTTTGCGAT AGGAACTACT TTTGGATTAG CCTCTTCACC TTGCATTACT CCAGTTTTAG CAACTCTTCT AGCTTGGGTA TCGCAAGCTA AAAACCCGAT AATCTCAATT ATTTTTTTAT TTTTCTTTGG AATAGGCCAA GTCACTCCAC TAATTATTGC GGGTGCCACG GCAGAAAACT TAAAAAAATT TTTAGAGCTT AGAAAATTTA GTCAAATAAT TCCCACCTTA AGCGGGATAT TTTTAGTAGC ACTAGGATTA TTAAATTTAT TTTCAAATTG GATTTAA
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Protein sequence | MQNGINNPGP FTIFLIFSAG LLTSLGPCSL SLLPITIAYI GGTEKKQFKL ISFSGGVVFS LVALGAASGL LGRIYGQIPS YYTSIVALIA IIMGLNLLGI LKFQFPNGPD LQKIEDKIPS LMAPFAIGTT FGLASSPCIT PVLATLLAWV SQAKNPIISI IFLFFFGIGQ VTPLIIAGAT AENLKKFLEL RKFSQIIPTL SGIFLVALGL LNLFSNWI
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