Gene A9601_16611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_16611 
SymbolccdA 
ID4718391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1403598 
End bp1404254 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content35% 
IMG OID640079387 
Productputative c-type cytochrome biogenesis protein CcdA 
Protein accessionYP_001010051 
Protein GI123969193 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.213566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATG GCATTAATAA TCCTGGCCCA TTTACTATAT TTTTGATTTT CAGCGCAGGA 
CTTTTAACGA GTCTTGGTCC ATGCTCATTA TCATTACTAC CAATCACTAT TGCTTATATA
GGAGGAACAG AGAAAAAACA ATTTAAACTT ATTAGTTTTT CAGGAGGAGT CGTTTTTTCC
CTCGTTGCAC TTGGTGCTGC CAGTGGATTA TTAGGTAGGA TATATGGGCA AATCCCATCT
TATTACACTT CGATTGTTGC CTTGATAGCA ATAATAATGG GTTTGAATTT ACTAGGAATT
TTAAAGTTTC AGTTCCCGAA TGGACCTGAT CTACAAAAAA TAGAGGATAA GATACCATCC
CTCATGGCAC CTTTTGCGAT AGGAACTACT TTTGGATTAG CCTCTTCACC TTGCATTACT
CCAGTTTTAG CAACTCTTCT AGCTTGGGTA TCGCAAGCTA AAAACCCGAT AATCTCAATT
ATTTTTTTAT TTTTCTTTGG AATAGGCCAA GTCACTCCAC TAATTATTGC GGGTGCCACG
GCAGAAAACT TAAAAAAATT TTTAGAGCTT AGAAAATTTA GTCAAATAAT TCCCACCTTA
AGCGGGATAT TTTTAGTAGC ACTAGGATTA TTAAATTTAT TTTCAAATTG GATTTAA
 
Protein sequence
MQNGINNPGP FTIFLIFSAG LLTSLGPCSL SLLPITIAYI GGTEKKQFKL ISFSGGVVFS 
LVALGAASGL LGRIYGQIPS YYTSIVALIA IIMGLNLLGI LKFQFPNGPD LQKIEDKIPS
LMAPFAIGTT FGLASSPCIT PVLATLLAWV SQAKNPIISI IFLFFFGIGQ VTPLIIAGAT
AENLKKFLEL RKFSQIIPTL SGIFLVALGL LNLFSNWI