| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_15641 |
|---|
| Symbol | |
|---|
| ID | 4718291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 1340270 |
|---|
| End bp | 1341199 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640079290 |
|---|
| Product | short-chain dehydrogenase/reductase |
|---|
| Protein accession | YP_001009954 |
|---|
| Protein GI | 123969096 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCA CTATTTCAAG ACCTAAAATC TCTAACTGGG AAACATCTAA TATTCCAAAC
CTTACAGGCA AAACAGCGCT AATTACTGGT GCGAATAGTG GTCTTGGATA CTACACTGCA
AAGGCCTTAG CAGAAAAAAA TGCTCATATC GTTATAGCTT GTAGATCGTT TGAAAAAGCT
AATCAAACTA TCAAAAAACT TAAAGGTCTT AATCCTGAAG GAATATTTAC ACCTTTAGAA
TTAGATTTGT CAGATTTAAA AAATATTGTT GAAGTTCAGT CCAAAATTTT TGATAATTTT
GAAAATTTGG ATTTACTAAT CAATAATGCA GGCATTATGC ATCCGCCTAA AACACTTAGT
GCCCAGGGAT ATGAAATACA ATTTGCAGTT AATCATTTAG CTCATATGCT TTTGACACTA
AAGCTACTTC CAATTATTGA AAAAAAAGAA GAATCTAGAA TAGTGACGGT TACTTCTGGA
GCACAATTTT TTGGCAAAGT TGGTTGGAAA AATCTTAAAG CTGAGAACTA TTACAATAAA
TGGGAATCTT ACTCTAATAG CAAATTAGCG AATGTAATGT TTGCTTTGGA ACTAAATGAA
AACTTAAAGC ACAAAAATAT ACTTTCTTTA GCTGCTCACC CAGGAATTGC AAAAACAAAT
CTCTTTACTG CTCAAAAACC TAACCCTAGT CCATTAGAAA CATTTTCATT GGAATTATTT
AGCCCTATTT TTCAAACTGC TGAGATGGGT GCTTTACCTC AACTTTTTGC AGCTACTTCA
CCAGACGCAA GAGGTGGTGA TCATTATGGA CCTAGATTTA ATTTCAGAGG TCATCCAAAA
CTATCCCCTA CTTCTCCTTT CGCCATGAAT AAAAAAGAAA GAAAAAATTT ATGGGAAAAA
AGCCTTGAAA TACTTAAAAA CTTCTTATAA
|
|---|
| Protein sequence | MTATISRPKI SNWETSNIPN LTGKTALITG ANSGLGYYTA KALAEKNAHI VIACRSFEKA
NQTIKKLKGL NPEGIFTPLE LDLSDLKNIV EVQSKIFDNF ENLDLLINNA GIMHPPKTLS
AQGYEIQFAV NHLAHMLLTL KLLPIIEKKE ESRIVTVTSG AQFFGKVGWK NLKAENYYNK
WESYSNSKLA NVMFALELNE NLKHKNILSL AAHPGIAKTN LFTAQKPNPS PLETFSLELF
SPIFQTAEMG ALPQLFAATS PDARGGDHYG PRFNFRGHPK LSPTSPFAMN KKERKNLWEK
SLEILKNFL
|
|---|
| |