Gene A9601_14061 details

Gene Information

• Locus tag: A9601_14061
• Symbol: rfbC
• ID: 4718127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 1177310
• End bp: 1177846
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640079127
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001009797
• Protein GI: 123968939
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAGC CTACAAGTAT TGACGGAGTT TTTGAAATTC AAACAGATAT TTTTAATGAT 
CAAAGAGGTT CCTTTATTAA TTTTTTTAGA TCATCAGAAA AAGCTTTTAA AAATTGTTGG 
TTTGATAAAG AAATAAAACA AGTTAATTTG AGTAAAAATA GTTTTAAAGG TACATTAAGA 
GGTTTGCATT ATCAATTAAA TCCCTACGCA GAAAAGAAAA TGGTTAGATG TATAAAAGGT 
TGTGTTTGGG ATGTTGCTGT TGATTTGCGA GAAGATTCTT CAACATATCT TTCATGGCAT 
TGTGTAGAGT TAAGCCCAAA ATTTGCAAAT GCCATTGTAA TTCCAGAAGG TTGCGCTCAT 
GGATTTCAAG TTCTTGAAGA GGATAGTGAG ATATTATATT TGCATTCTGG GGATTGGATT 
AAGGAATCTG AAACTGGTAT AAGATGGAAT GATCCTCAAA TAGCAATTTC ATGGCCTTTG 
CAGGCTGTTA ATTTAAGTGA AAGAGATCAA AATTTGCCTT ATTTATCTGA GAAATGA 

 

Protein sequence

MLKPTSIDGV FEIQTDIFND QRGSFINFFR SSEKAFKNCW FDKEIKQVNL SKNSFKGTLR 
GLHYQLNPYA EKKMVRCIKG CVWDVAVDLR EDSSTYLSWH CVELSPKFAN AIVIPEGCAH 
GFQVLEEDSE ILYLHSGDWI KESETGIRWN DPQIAISWPL QAVNLSERDQ NLPYLSEK