| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_13351 |
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| Symbol | psbC |
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| ID | 4718054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 1109686 |
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| End bp | 1111068 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640079054 |
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| Product | photosystem II PsbC protein (CP43) |
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| Protein accession | YP_001009726 |
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| Protein GI | 123968868 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATAA TTTATTAAGA GCTCCAAACC AAAGTATTGA GGAAACTGGT
TATGCCTGGT ATGTAGGCAA CGCTAGATTA ATCAATTTAT CTGGACGTTT ATTGGGAGCT
CACATTGCTC ACTCTGGACT AATAGTCTTT TGGGCGGGAG CAATGATGCT CTTTGAGGTT
AATCATTTCA CTTTTGATAA ACCAATGTGG GAGCAAGGTT TAATCTGTAT GCCACACGTT
GCAATGTTTG GCTACGGGAT AGGCCCAGGT GGTGAAGTTA CTGATATCAT GCCTTTCTTC
CAAGCAGGCG TGGTTCATTT GATAGCTTCT GCTGTTCTTG GTTTTGGTGG TATTTACCAT
TCATTAGCAG GCCCAGAAAA ACTTGAAGAA GATTTTCCAT TTTTCTCCAC CGATTGGAGA
GATAAAAATC AAATGACAAA TATTCTTGGA TATCATTTGA TTGTATTAGG TGTAGGTGCA
TTAGCATGGT CAGTTAACTG GTGTTTTATT GGCGGTGCAT ATGACACATG GGCACCTGGT
GGTGGTGAAG TCAGACTTGT TAATCCAACT TTAGATCCGA GAGTTATTCT TGGTTATCTA
TTTAGATCTC CATGGGGAGG AGCTGGTTCA ATAATCGGTG TCAACTCCAT CGAAGATATT
GTTGGTGGAC ACGTTTACGT GGGTATTACT GCAATTATTG GAGGAATATT CCATATCTTC
ACAAAACCCT TTGGATGGGC AAGAAGAGCA TTCATCTGGA ATGGTGAAGG ACTATTAAGT
TATGCTCTTG GTGGAATTTG TGTAGCAAGT TTCATTGCTT CAACATTCAT TTGGTTTAAC
AATACTGCTT ACCCTTCAGA ATTTTATGGC CCAACAAATG CTGAAGCTTC ACAGGCTCAA
AGCTTTACTT TCCTAGTGAG AGACCAAAGA ATTGGAGCTA ACGTAGGTTC AACAATGGGA
CCAACAGGTC TAGGTAAGTA TCTCATGAGA TCTCCTACTG GTGAAATTAT ATTTGGTGGT
GAAACAATGA GATTTTGGGA TTTCAGAGGT CCATGGTTAG AGCCTTTAAG AGGTCCTAAT
GGTTTGAGCC TTGAGAAAAT TCAAAATGAT ATTCAGCCTT GGCAGGTAAG AAGAGCAGCT
GAATATATGA CTCATGCTCC TAACGCTTCT ATCAACTCTG TTGGTGGAAT CATTACAGAG
CCAAATGCTG TTAACTTCGT TAACCTAAGA CAATGGTTAG CTGCAGCTCA ATTCTTCCTA
GGATGGTTTA CATTTATCGG TCATCTTTGG CATGCTGGAC GTGCTAGAGC TGCCGCTGCT
GGTTTCGAGA AAGGAATCGA CAGAAAGAGT GAACCAGCTC TAGAAATGCC TGATCTAGAT
TAA
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| Protein sequence | METPFNNLLR APNQSIEETG YAWYVGNARL INLSGRLLGA HIAHSGLIVF WAGAMMLFEV
NHFTFDKPMW EQGLICMPHV AMFGYGIGPG GEVTDIMPFF QAGVVHLIAS AVLGFGGIYH
SLAGPEKLEE DFPFFSTDWR DKNQMTNILG YHLIVLGVGA LAWSVNWCFI GGAYDTWAPG
GGEVRLVNPT LDPRVILGYL FRSPWGGAGS IIGVNSIEDI VGGHVYVGIT AIIGGIFHIF
TKPFGWARRA FIWNGEGLLS YALGGICVAS FIASTFIWFN NTAYPSEFYG PTNAEASQAQ
SFTFLVRDQR IGANVGSTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN
GLSLEKIQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLAAAQFFL
GWFTFIGHLW HAGRARAAAA GFEKGIDRKS EPALEMPDLD
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