| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_09731 |
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| Symbol | dapF |
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| ID | 4717683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 842035 |
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| End bp | 842895 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640078687 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001009364 |
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| Protein GI | 123968506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.137092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TAAGTTTTGA AAAATATCAA GGTAACGGAA ATGATTTCGT AATAATAGAT
TCTAGAGGAA ATGAATTATA TAAAAATTAC AAGACAAATA AAATATTTGA TATAAAAAAA
ATTTGCAACA GGCAATTTGG TGTTGGAGCA GATGGTGTGA TTTTTATAGA AGAACCTAAT
GAAGATAATT ATGCAAAAAT GATAATTTTT AATTCTGATG GTTCTGAAGC ACAAATGTGT
GGAAACGGAA TTAGGTGTTT AGTTGAGTAT CTCCACGTAA ATGATTCAAT GAATAATGAA
AATATAGAAT ATAAAATTGA GACTAAAGCA GGTTTAAAAA TTGCAAAATA TATAAATGAT
GAAATTACAG TTAAAATGGG AGTCCCTATT TTAGAAGGTC AAAATATTCC AACAACAATT
GAAAAAAAAA TAAATTCAAT TCCTTCACAC GAATTTATTG AGAAAGATTT TAGTAATATG
GGTTATGCCG TAGGAATGGG AAATCCTCAT TTAATATTCT TTGTAAAAGA CATAGAGTCA
ATTGTTCTTT CCAGACTTGG TCCTATATTT GAAAAAAATG AATTATTTCC TGAAAAAACT
AATGTACATT TTTGTCAAAT TTTAAATAGA GATAATATAA AAGTAAAAGT ATGGGAAAGA
GGTGCAGGAC CAACCTTAGC TTGTGGAACA GGTGCCTGTG CTATCCATGT GGCAGCTTAT
AAATTAGGCC TTTGTAATTC ACAAACCATA GTAACCTTAC CAGGAGGTAA TCTTAAAATT
GATTGGTCAG AAGACGATTG TGAAGTAATG ATGACCGGTA ATGCTAAAAA GGTTTTCTCA
GGATCAATTT TAGTAAATTA A
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| Protein sequence | MKNISFEKYQ GNGNDFVIID SRGNELYKNY KTNKIFDIKK ICNRQFGVGA DGVIFIEEPN
EDNYAKMIIF NSDGSEAQMC GNGIRCLVEY LHVNDSMNNE NIEYKIETKA GLKIAKYIND
EITVKMGVPI LEGQNIPTTI EKKINSIPSH EFIEKDFSNM GYAVGMGNPH LIFFVKDIES
IVLSRLGPIF EKNELFPEKT NVHFCQILNR DNIKVKVWER GAGPTLACGT GACAIHVAAY
KLGLCNSQTI VTLPGGNLKI DWSEDDCEVM MTGNAKKVFS GSILVN
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