| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_04821 |
|---|
| Symbol | mrcB |
|---|
| ID | 4717180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 417399 |
|---|
| End bp | 419168 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640078194 |
|---|
| Product | putative penicillin binding protein |
|---|
| Protein accession | YP_001008877 |
|---|
| Protein GI | 123968019 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.725323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAAGA TTAAATTCAA ATCTTTTGTT TTAATAATTC CAATATTAAT TTTTTCTGGA
ATATCTTTTT ATTTTTTTAG TCTAATATTT AATATCTTAA AATTTGACGT TTCTAAAAAT
AAAAAGTCTC AGGAAACCAA ATATTCTTAC GTAATATCAT CTTCTGATAA TAAGATACTA
AGTAAATTAA GCCGCAAATT TGAAATAGAT AATAGTTATG ATAAAATTCC ATTTTTTCTT
AAACATTCTT TTATATCTTC CGAGGATAAA AGATTTTATA AACATAATGG AATAGATTTA
AAAAGTATTT CACGTGCCCT TATTCAAAAT TTTAGAAGTG GTTATGTTAA AGAGGGAGGA
AGTACGATTA CACAACAAGT TTCTAGATTA CTTTTTCTAA ATAATGATTT AAGTTTTCAA
AGAAAAATCA AAGAAATATT GATATCACTC ATACTTGAAT TTAGATATAA CAAAAATCAA
ATTTTAAAAT TATATTTAAA CAATATTTAT CTAGGATCAG GAGCATACGG GGTAAACGAG
GCTGCCCAAG TTTATTTTGG AAAATTTGTA GAAGAATTGA CATTATCAGA GATCGCATTA
ATTGCAGGAT TAGCTCCAGC TCCATCAATT TATTCACCTT ATCAAAATTT AGAACTAGCT
ATTAAAAATA GAAATAAAGT TCTTGAATCA ATGTATGTTG ATGGATATAT TTCTCTTGCA
AATAAGGATA AGGCTATTAA AGAAAAAATA GATTTAAATT ATCAAAAAGC TGATAATTTT
TTAGATGATA AATTACTAAT AAAATTTATT CTTCAGGAAA CAGATAAAAA AATTGGAAGT
AAAAATGATT ATAAGTTTTT AAGAATTAAA TCTTCTATCA ACAAAGATTG GCAAGAAAAA
GGTCAAAAAA TATCAACATA CGCAGGGCCT AAAGAACTTG AATTTGGTCT GTTATCTATC
GAATCAAACA CAGGACTAAT CAGGACAATG ATAACCAGCA AAAATCCATC AATTAATGAA
TACAATAGAG TGATTTCATC TGTAAGACCT TTAGGTTCTA CTTTTAAAAT AATCCCTTAT
GCTGCTGCAT TAATAGAAGG AACAAAATTA AGCGATAAAT TTGAAGACTT ACCAATATGC
TGGGAAAGTT ATTGCCCAAA AAATTTTTCA GAAGACTATA GAGGTTCAAT ATCTTTGATT
GAATCATTTA AAAGTTCATC AAATATCGTT CCAATATCAA TAACAAAAAC AATCGGCTTA
AAAAATATAA TTAATTTAGC GAATTCATTT GGACTTGGTT ACGAGCAAGA GTTTGAGGAA
TTCCCATCAT TAGCTATTGG CGCCTACGGA GATAATCTTT TAAACATCAC AAATGCATAT
TCTGCAATAA ACAATAATGG GAAAATTCAA AGCACTGAAA TCATAGAAAA AATAGAATCA
TTTAAAAAAC AACCTATTTG GGAAAATAAA TCTATTTCCA AGAAAATATT AGATTTAAAA
ATAAACAAGA AAATAAATAA ACTTCTTGAA AAATCTGTAA AAGAAGGCAC TTCAAAAGCA
GCCTCTATAA AAGGAAATAA AATTTATGGG AAAACAGGAA CATCTGATGG GAATAAAGAT
CTCTGGTTTA TTGGTTCCAT TGATAACCTT ACAACAGGGA TCTGGATAGG TTATGACGAT
AACAAGGAAA CTGAATTATC TAGTGGGAAT GCAGCTTATT TATGGAAGAA GTTCATATCT
GAAATTTATA AAATTCAAAT TAAAAAATAA
|
|---|
| Protein sequence | MQKIKFKSFV LIIPILIFSG ISFYFFSLIF NILKFDVSKN KKSQETKYSY VISSSDNKIL
SKLSRKFEID NSYDKIPFFL KHSFISSEDK RFYKHNGIDL KSISRALIQN FRSGYVKEGG
STITQQVSRL LFLNNDLSFQ RKIKEILISL ILEFRYNKNQ ILKLYLNNIY LGSGAYGVNE
AAQVYFGKFV EELTLSEIAL IAGLAPAPSI YSPYQNLELA IKNRNKVLES MYVDGYISLA
NKDKAIKEKI DLNYQKADNF LDDKLLIKFI LQETDKKIGS KNDYKFLRIK SSINKDWQEK
GQKISTYAGP KELEFGLLSI ESNTGLIRTM ITSKNPSINE YNRVISSVRP LGSTFKIIPY
AAALIEGTKL SDKFEDLPIC WESYCPKNFS EDYRGSISLI ESFKSSSNIV PISITKTIGL
KNIINLANSF GLGYEQEFEE FPSLAIGAYG DNLLNITNAY SAINNNGKIQ STEIIEKIES
FKKQPIWENK SISKKILDLK INKKINKLLE KSVKEGTSKA ASIKGNKIYG KTGTSDGNKD
LWFIGSIDNL TTGIWIGYDD NKETELSSGN AAYLWKKFIS EIYKIQIKK
|
|---|
| |