| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_02111 |
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| Symbol | rluD |
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| ID | 4716895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | - |
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| Start bp | 196692 |
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| End bp | 197651 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640077910 |
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| Product | putative pseudouridylate synthase specific to ribosomal large subunit |
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| Protein accession | YP_001008606 |
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| Protein GI | 123967748 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.496147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA ATAATCAAAA TTCTTTCGGC ATTGGAGAAG GTGAGCTTAT AGAAATTATT
TATGAGCTAC CTCTTCCTAT GAGGCTAGAC AGATGGTTGG TAAGTAAAAG GCCAGAACAA
AGTAGAGCAA GAATTCAACA TTTTATAAAT TCAGGTTTAG TACTTGTAAA CTATAAGACT
GCGAAAGCAA AGACCCCATT AAAAAATGGC GACAATATTC AAATATGGAT GCCTCCTCCA
GAACCTCTTA TTTATTTGAA ACCTGAAAAA ATGGATTTAA ATATCCTTTT TGAAGACGAG
CACATCATAG TAATTAATAA ACAATCAGGA CTAATTGTTC ATCCAGCCCC TGGACACAAA
TCTGGAACTT TAGTGAATGG ATTACTTTTT CACTGTAAAG ATCTACCTGG AATTAATGGG
AAATTAAGAC CTGGGATTGT TCACAGATTA GATAAAGATA CCTCCGGATG TATGGTTGTT
GCAAAAAGCC AAGAGGCATT AGTAAATCTC CAGAAACAAA TTAAAGAAAA AATAGCATCA
CGCGAATATA TTGCAGTAAT TCATGGAGCA CCGAATTCTG AAGAAGGCCA AATAGTGGGA
AACATTGGCA GAGATAAATT AAATAGATTG AAATATAAAG TAGTTGAAGA AACTTCAGGA
AGGTATGCCT GTACCTATTG GAAATTAGAA GAAAGATTTG GCAATTACTC ATTAATGAGT
TTCAAGCTAG ATACGGGGCG AACGCATCAA ATAAGAGTAC ATTGCGCTCA CATTAATCAT
CCAATTGTGG GTGATCCGTT ATATGGAAGA TGTAAAAAAC TACCATGTAA ATTAGATGGC
CAAGCTTTAC ACGCCATTAA GCTTGGACTT ATACATCCAA TAAATGGTAA AGAAATGATA
TTTGAATCAG AATTACCATT AGATTTTCAA AAATTACTAA GTGTTCTTAA AATTAAATAA
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| Protein sequence | MELNNQNSFG IGEGELIEII YELPLPMRLD RWLVSKRPEQ SRARIQHFIN SGLVLVNYKT
AKAKTPLKNG DNIQIWMPPP EPLIYLKPEK MDLNILFEDE HIIVINKQSG LIVHPAPGHK
SGTLVNGLLF HCKDLPGING KLRPGIVHRL DKDTSGCMVV AKSQEALVNL QKQIKEKIAS
REYIAVIHGA PNSEEGQIVG NIGRDKLNRL KYKVVEETSG RYACTYWKLE ERFGNYSLMS
FKLDTGRTHQ IRVHCAHINH PIVGDPLYGR CKKLPCKLDG QALHAIKLGL IHPINGKEMI
FESELPLDFQ KLLSVLKIK
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