Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_01471 |
Symbol | tmk |
ID | 4716831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 136868 |
End bp | 137506 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640077846 |
Product | thymidylate kinase |
Protein accession | YP_001008542 |
Protein GI | 123967684 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.702638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAA AATTTATCGT TATTGAGGGT ATTGATGGAT GTGGTAAAAC CACCCAAATA GATGAACTAT CTAAGTGGCT ACCCAACAGT GGTTTAATAA AGAAAGGGTC TAAATTAATC ACAACTAGAG AGCCAGGAGG CAGTCTTTTA GGAAAAAAAC TTAGAGGACT GATTCTTGAT AATAATAAAA ATAACAAGCC TTCATCTCTT GCGGAATTAT TACTTTATTC AGCGGATAGA GCTGAACACG TTTCCAAAAT TATTTCACCT GCTTTAAATA ATAATGATTG GGTAATAAGT GATAGATTTT CTGATTCCAC ACTGGCTTAT CAAGGTTATG GAAGAAATAT AAATTTAGAA ATAATTAAAA ATATTGAATC TATTGTGTGT CAAGGAGCAT CCCCTGATCT CACTTTCTTC TTAGAAATTT CTCCAGAAGA GAGCATATTC CGAAGAAAAA ATGAAATTCC AGACAGAATA GAATCAGAAG GTATTAGATT TTTAGAAAAA GTAAATGAAG GATTCAAACT AATTGCCAAA CAAAAAAACT GGAAAGTAAT ATCAGCTTCA CAAAATATTC AAACTATTTC TAATCAAATT AAAGAGACTT TGCTAAACAA TTTTTCTAAT AACAAATGA
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Protein sequence | MKGKFIVIEG IDGCGKTTQI DELSKWLPNS GLIKKGSKLI TTREPGGSLL GKKLRGLILD NNKNNKPSSL AELLLYSADR AEHVSKIISP ALNNNDWVIS DRFSDSTLAY QGYGRNINLE IIKNIESIVC QGASPDLTFF LEISPEESIF RRKNEIPDRI ESEGIRFLEK VNEGFKLIAK QKNWKVISAS QNIQTISNQI KETLLNNFSN NK
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