| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_01451 |
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| Symbol | rpaA |
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| ID | 4716829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 135124 |
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| End bp | 135906 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640077844 |
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| Product | two-component response regulator |
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| Protein accession | YP_001008540 |
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| Protein GI | 123967682 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.480778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT CAATCCTTTT AATTGAAGAC GATCGTGACA TGCGTGATTT AGTTGCTAGG
CATTTAGAAC ATTCTGGTTT CGATGTCCAA AAAGCTGAAG ATGGAATTAA AGGACAAGCA
TTAGCTCTTC AATACTCACC AGATTTAATA CTCTTAGATT TAATGCTACC AAGTGTTGAT
GGATTAACTT TATGCCAGCG ACTAAGAAGA GATGAAAGAA CATCGAATAT ACCAATTTTG
ATGATAACTG CTTTGGGCGG CCTTAAAGAT AAAGTTACTG GGTTTAATTC TGGAGCAGAT
GATTACATTA CTAAACCATT CGATCTAGAA GAGTTACACG TGCGCATAAA AGCTTTATTA
AGAAGAACCA ACAGAGCACA ATTAAATTCT AGTAACCAGC AAGAAATATT AAATTATGGC
CCATTAACTC TTGTTCCGGA AAGATTTGAA GCTATATGGT TTGAATCTCC TGTTAGGTTA
ACGCATCTTG AATTTGAACT ACTCCATTGT CTTTTGCAGA GGCATGGTCA AACTGTATCG
CCAGCATTAA TTCTTAAAGA AGTATGGGGA TATGAACCTG ATGATGATAT TGAGACAATA
AGAGTTCATA TTAGACACTT GCGCACTAAA CTTGAACCCG ATCCCCGTAA ACCTATTTAT
ATAAAAACTG TATACGGTGC TGGATATTGT CTTGAGTTAC CTATTGGTTC TCAAGTTGAA
ACTGCAAGGC AGGAGTTTAT TAAAACCAGA AATCCTGATT TGATTAATTC TGCAGTAGAT
TAA
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| Protein sequence | MKISILLIED DRDMRDLVAR HLEHSGFDVQ KAEDGIKGQA LALQYSPDLI LLDLMLPSVD
GLTLCQRLRR DERTSNIPIL MITALGGLKD KVTGFNSGAD DYITKPFDLE ELHVRIKALL
RRTNRAQLNS SNQQEILNYG PLTLVPERFE AIWFESPVRL THLEFELLHC LLQRHGQTVS
PALILKEVWG YEPDDDIETI RVHIRHLRTK LEPDPRKPIY IKTVYGAGYC LELPIGSQVE
TARQEFIKTR NPDLINSAVD
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