Gene A9601_00121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_00121 
Symbol 
ID4716694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand+ 
Start bp16022 
End bp16633 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID640077709 
ProductRNA recognition motif-containing protein 
Protein accessionYP_001008407 
Protein GI123967549 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.3683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTATTT TTGTTGGCAA TTTGCCTTTC CGCGCAGAGC GCGAAGATGT TATACAATTA 
TTTGCCCCTT TTGGTGAAGT TTTAAATTGT TCCCTTCCCT TAGAGAGAGA TACTGGAAGG 
AAAAGAGGAT TCGCATTTAT TGAAATGGCA GATGAAGCGA TTGAGTCAAC AGCTATTGAT 
GGTTTGCAAG GCAGGGAACT TATGGGCAGA CCATTAAGAA TTAATAAAGC TGAGCCAAGA 
AGTTCTGGTG GATCTCGTAG AGGAGGAAGA GGCGGTGGTT ATGGTGGAGG TAATAACAGC 
GGTGGCTATG GCGGTGGCTA CGGTGGAGGT AATAACAGCG GTGGCTATGG CGGTGGTTAT 
GGTGGAGGTA ATAACAGCGG TGGCTATGGC GGTGGCTACG GTGGTGGCAA TAACAGCGGT 
GGCTATGGCG GTGGCTACGG TGGAGGTAAT AACGGATCTA ATAGCTCTTA CGTTAATAAA 
TCTTCTGGAG CAGAAGGCTG GGAAGACAGA AGTTATGGAA ATTCTTCTGA AAACTCTGAA 
TATGAAAATG GTAGGAGCAG GAGAAAGAGG GGAGTGTCCA ACGAGAACAA TGCTTCAAAC 
GAGACAAATT AG
 
Protein sequence
MSIFVGNLPF RAEREDVIQL FAPFGEVLNC SLPLERDTGR KRGFAFIEMA DEAIESTAID 
GLQGRELMGR PLRINKAEPR SSGGSRRGGR GGGYGGGNNS GGYGGGYGGG NNSGGYGGGY 
GGGNNSGGYG GGYGGGNNSG GYGGGYGGGN NGSNSSYVNK SSGAEGWEDR SYGNSSENSE 
YENGRSRRKR GVSNENNASN ETN