Gene A9601_00081 details

Gene Information

• Locus tag: A9601_00081
• Symbol: nusB
• ID: 4716690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 11080
• End bp: 11706
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640077705
• Product: transcription antitermination protein NusB
• Protein accession: YP_001008403
• Protein GI: 123967545
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAATA GATCCCTTTC TAGAGAATTG TCTTTAATTT CTCTTGGCCT GATAAAAGAT 
AAAGGTGATT TTAAACTAAA TAAATTTCAG ATAGAAGAAA TTATTGAATC CGCAATTGAT 
TCACTGATAA ACCATTGCAG AGAGGAGTTA GATAATTGCG AGTCAGAGTT GGAAAATGCC 
TCACAAAAAA TATTAGATAG TGAATTGCAA GAAGGTGTTG ATTCTTCTTA TTCAAATGTT 
AGAGATGAGT TAAAAAAATC TCTGACAAAA ATTGAAAATG TAATGAATAC ACTTTCAGTA 
ACTTTAGATT TTCCCAAATT AATTATTTCT AGCGGTCAAA TAGATATTAG AGAGGATGTG 
AATCAAAGGA TTTGTAATAT AATAAATAAC CTTAAAAGTA TTGATTCTGA TATCGATCAA 
GTCATGGATG GTTGGAGATT AAAAAGATTA CCACGAATTG ATAGGGATAT TTTGCGTTTA 
GCTTATGTTG ACATCAATTT TTTGAATACT CCTGTCGCTG TTGCTTGTGA TGAGGCTGTT 
AATTTAGCTA ATAAATATAG TGATTTGAAA GGAAGAAAAT TTATTAATGG CGTTTTAAGG 
AGATTACAAA CAATTTCATT GTCATAA 

 

Protein sequence

MHNRSLSREL SLISLGLIKD KGDFKLNKFQ IEEIIESAID SLINHCREEL DNCESELENA 
SQKILDSELQ EGVDSSYSNV RDELKKSLTK IENVMNTLSV TLDFPKLIIS SGQIDIREDV 
NQRICNIINN LKSIDSDIDQ VMDGWRLKRL PRIDRDILRL AYVDINFLNT PVAVACDEAV 
NLANKYSDLK GRKFINGVLR RLQTISLS