Gene Hhal_2429 details

Gene Information

• Locus tag: Hhal_2429
• Symbol: atpC
• ID: 4710799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 2669630
• End bp: 2670055
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639856905
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001003994
• Protein GI: 121999207
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0464757
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACGC TCCAAGTCGA CATCGTAAGT GCTGAAGAGC AGCTGTACGC CGGCCAGGCG 
AGCATGGTCA TTGCGCCGGC GGCCGAGGGT GACGTGGGCA TAGCCCCGCG TCACGCTCCG 
CTGCTGACCC GGTTGCGTCC GGGTGAGCTG CGCATCACCC CGGAGGGCGA CGAAGAGGAA 
TTCTTCTTCT ACGCCTCCGG GGGCCTGCTC GAGGTCCAGC CGCACAAGGT CACCGTCCTC 
GCCGACACGG CGGTCCGTGC CCGGGACATC GACGAGGCCG CGGCCCTCGA GGCCAAGCGG 
CGGGCCGAGG AGAAGCTCCG CGAGCAGAAG GACGAGGTGG ACTACAGCTC GGTCCAGGCG 
GAGCTTGCCG AGGCCATGGC GCAGCTGCGA ACCCTGGAGA GCCTGCGCAA GCGGGCCAAG 
CGCTGA 

 

Protein sequence

MSTLQVDIVS AEEQLYAGQA SMVIAPAAEG DVGIAPRHAP LLTRLRPGEL RITPEGDEEE 
FFFYASGGLL EVQPHKVTVL ADTAVRARDI DEAAALEAKR RAEEKLREQK DEVDYSSVQA 
ELAEAMAQLR TLESLRKRAK R