Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2356 |
Symbol | |
ID | 4709091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2583372 |
End bp | 2584508 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639856831 |
Product | sulfonate ABC transporter periplasmic-binding protein |
Protein accession | YP_001003921 |
Protein GI | 121999134 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.477529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCCCGC TTTTGACCCA ACGGCAACCC CGAGGGAGAG ATCCCATGAG CCGCGAACGA CGCCCGCTAC GCCAACGACT CACCCACCTG TGCACCGCCG CCGCCCTCCT CGGCACCGCT GCACTGCCGC TCGCAGCCAC CGCCGACGAA CGCGACTCCT TCCGCATCGC CTGGAGCATC TACGTCGGGT GGATGCCCTG GGGCTACGGC GAGGCCGAAG GCATCGTCGA CAAGTGGGCC GACAAGTACG ACATCGAGAT CGATGTGGTG CAGATCAACG ACTACATCGA GTCCATCAAC CTCTACACCG CCGGCTCTTT CGACGGCGTC ACCCTGACCA ACATGGACGC CCTGACCATC CCGGCGGCCA GCGGCGTGGA TACCACCGCG TTGATCGCCG GCGACTTCTC CGACGGCAAC GACGGCGTGG TCCTTGAGGG GACCGACGAC CTGGCCGACA TCGAAGGCCA ACGCGTCCAC CTGGTCGAGC TGTCCGTATC GCACTACCTG CTCGCCCGCG CCCTCGACTC GGTGGGGCTG AGCGAGCGGG ACGTCCAGGT GGTCAACACC GCCGACGCCG ACATCGTCGG GGCCTTCCGT TCCCGCGATG TCCAGGCCGC CGTGGCCTGG AACCCACAGT TGGGCGAGAT CCGCCGACAG GACGACGCCC ATGTGGTCTT CGACTCCTCG GACGTACCCG GCGAGATCAT CGACCTGCTC GGCGTGCGCA CCGAAGTGCT TGAAGAGCAC CCGGAGCTTG GCAAGGCGCT GACCGGCGCC TGGTACGAGA TCATGGACGT CATGTCCGGC GACGATGCCG CCGGCGAGGC CGCTCGCACC GCGATGGCCG AGGCGGCGGG CACCGACCTG GCCGGCTACG AGGAGCAGCT CGCCTCGACC ACGTTCTTCT ACGACCCCGC CGAAGCGGTG GACTTCGTCA CCAGCGAACA GCCCGCCGAG ACCATGGAGA ACGTCCGCCA GTTCGCCTAC CAGCACGGAT TGCTCGGTGA GCGCGCCCCG AGCCCGGATT TCGTCGGCAT CGAGCTCGCC GACGGCTCGA CCCTGGGCGA TGCGAACAAC GTCCAGTTGC GCTTCACCGA CCGCTTCATG CGCAAGGCCG CCGAAGGCGA GCTGTAA
|
Protein sequence | MLPLLTQRQP RGRDPMSRER RPLRQRLTHL CTAAALLGTA ALPLAATADE RDSFRIAWSI YVGWMPWGYG EAEGIVDKWA DKYDIEIDVV QINDYIESIN LYTAGSFDGV TLTNMDALTI PAASGVDTTA LIAGDFSDGN DGVVLEGTDD LADIEGQRVH LVELSVSHYL LARALDSVGL SERDVQVVNT ADADIVGAFR SRDVQAAVAW NPQLGEIRRQ DDAHVVFDSS DVPGEIIDLL GVRTEVLEEH PELGKALTGA WYEIMDVMSG DDAAGEAART AMAEAAGTDL AGYEEQLAST TFFYDPAEAV DFVTSEQPAE TMENVRQFAY QHGLLGERAP SPDFVGIELA DGSTLGDANN VQLRFTDRFM RKAAEGEL
|
| |