| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2323 |
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| Symbol | def |
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| ID | 4709355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2548767 |
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| End bp | 2549276 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639856798 |
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| Product | peptide deformylase |
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| Protein accession | YP_001003888 |
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| Protein GI | 121999101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.180908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTCC TCGATATCCT TGTCTATCCC GATCCCCGCC TCCGTGAGCG GGCCGAGCCC
GTCGCCGAGG TGGACGACGC CGTCCGCCGC CTGGTGGACG ACATGCTTGA GACCATGTAC
GAGGCCCGCG GCATCGGTCT GGCCGCCACG CAGGTGGGCG ACCGCCGGCG GGTGGCGGTG
ATCGATGTGT CCGAGGAGCG TGACGAGCCG CTGGTGCTGA TCAATCCGGA GATCCTCGAG
GCCACCGGCG AGGCCAGCGG CGAGGAAGGC TGCCTGTCCA TCCCGGGCTA CTACGACGAT
GTGGCACGGG CCACCCGGGT GCGCTACCGC GCGCTGGACC GCGACGCCCA GCCCATCGAG
GGCGAGGCCG AGGGGACGCT GGCCGTCTGC CTGCAGCACG AGATCGACCA TCTGGACGGT
CGACTGTTCA TCGACTACCT CTCCGAGCTC AAGCGCAAGC GGGTGCGCAA GCGCATGGAG
AAACGCGAGC GGCTCAGCGC GGCGGGCTGA
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| Protein sequence | MALLDILVYP DPRLRERAEP VAEVDDAVRR LVDDMLETMY EARGIGLAAT QVGDRRRVAV
IDVSEERDEP LVLINPEILE ATGEASGEEG CLSIPGYYDD VARATRVRYR ALDRDAQPIE
GEAEGTLAVC LQHEIDHLDG RLFIDYLSEL KRKRVRKRME KRERLSAAG
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