| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2312 |
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| Symbol | |
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| ID | 4709384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2538250 |
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| End bp | 2539521 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639856787 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001003877 |
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| Protein GI | 121999090 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAGA TCTTTCTGGC CCGTCAGCCG GTATTCGACC GCGAGCTGCG GGTCTGTGGC
TACGAACTCC TCTACCGCGC CGGGCGTGAG GAATCGGCGC GTTTTGCCGA CGGCGACGCG
GCCACGGCCA CTGTAATCCT CAGCGCCTTC ATGGAGATCG GGCTGCGCTC GATCACCGGT
GGGCAGCCGG CCTACCTGAA CCTCACCCGG CGATTCCTCC TGCAGCAGCC CGTGCCGTTC
CCGCAGCACG AGGTGGTGAT CGAGGTCCTC GAGGACGTGG CCCCCGACCA GGAGTTGCGG
GCAGCACTGT GCCGGTTGTC GCGGCAGGGT TACCGGATCG CCCTGGACGA CTATCTGCTC
GATGACTCCG GCCGGGAGCG GCTGCTGCCG TGCGTGGACA TGGTCAAGGT CGACGTCCTC
GGCATGGCGC CGCAGGAGAT CGTGCGCCAT GCGCGGACCC TCCAGCGTCA GGGGGTGCCG
TCGTTGCTGG CCGAGAAGAT CGAGAGCCGA GAGGTGATGG ATCTGTGCCG TGCGGCGGGG
TTCGACTATT TCCAGGGGTT CTTCCTGTCG CGGCCGACCA CGCTGTCGCG GCGCTCGGTG
CCGCACAACC GCCTGCCGCT GTTGCGCCTG ATCGCCTCGC TGCAGCGCCC GGAACTGGAT
GTGCGGGAGA TCGAGCAGAT CATCGGCCAG GATGTGTCAC TGTCCTACAA GATCCTGCGC
TATCTGGCCT CGCCGCTGTT CCCCACCCGG GACATCGACA GCATCCGCGC CGCCGTGCTC
TACCTGGGGC GCAGGCAGCT GGCGAACTGG GCTGTGCTGT TGGCCATGAC CTCCTGCAAC
GATCAACCCT CTGAACGCAT CGTCGCCCTG CTGGTGCGGG CGCGCACCTG CGAGCAGTTG
GTGCGCCACC GCTACGGCGG TTCCGATCCT GGCGCGGCGT TCACCATCGG ATTGTTTTCC
GGGCTCGATG CTGTGCTCGA CGCGCCGCTG TCGGTCATCT GTGCCGAGCT GCCGCTCAGC
TTCGAGGTGC GTCAGGCGCT GCTTGAGCTT GAGGGTCCCT ACGGGCGCAT CCTCGCCGCG
GTCCTGGCCC AGGAGCGGGG AGACTGGGAA CGTCTGGCAG CCACCGGGGT CGATCCCATG
CAGGTCAACC ATCACTATCT CGAGTCGCTG AAGTGGGCGG ACGCCCAGTG GGCCTGGCTA
GCTCATCTAT CCCGCAGCGA GCGTCCGGAA CGGTTGGCCG CCCGCCGGCG TGGTCCGCCG
TCGGAATCGT GA
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| Protein sequence | MSEIFLARQP VFDRELRVCG YELLYRAGRE ESARFADGDA ATATVILSAF MEIGLRSITG
GQPAYLNLTR RFLLQQPVPF PQHEVVIEVL EDVAPDQELR AALCRLSRQG YRIALDDYLL
DDSGRERLLP CVDMVKVDVL GMAPQEIVRH ARTLQRQGVP SLLAEKIESR EVMDLCRAAG
FDYFQGFFLS RPTTLSRRSV PHNRLPLLRL IASLQRPELD VREIEQIIGQ DVSLSYKILR
YLASPLFPTR DIDSIRAAVL YLGRRQLANW AVLLAMTSCN DQPSERIVAL LVRARTCEQL
VRHRYGGSDP GAAFTIGLFS GLDAVLDAPL SVICAELPLS FEVRQALLEL EGPYGRILAA
VLAQERGDWE RLAATGVDPM QVNHHYLESL KWADAQWAWL AHLSRSERPE RLAARRRGPP
SES
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