Gene Hhal_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2283 
Symbol 
ID4709117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2506577 
End bp2507380 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID639856759 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001003849 
Protein GI121999062 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.703686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATCG CCTCTTGGAA CGTGAACTCG CTGAAGGTCC GCCTGCCCCA GGTCAAGGCG 
TGGGCGCAGA GCGCGACGCC GTCGGTCATC GCCCTGCAGG AGACGAAGGT CCCCGACGAT
CAATTCCCCC TCAAGGCGTT GCAGGAGGCC GGCTATCGGG CCGCCTTCGC CGGCCAGCGG
ACCTACAATG GGGTGGCCGT CCTCGCCCGC AGCGCCCCGC AGGACGTGGT GACCGATCTG
CCCGGCTTTG CCGATACCCA GCGTCGGGTG CTCGCCTGCA CCGTCTCCGG GGTCCGGGTG
ATCAACCTCT ACGTGCCCAA CGGCCAGGAG GTGGGGTCCG AGAAGTACGG CTACAAGCTG
CGCTGGCTGG AGGCCCTCCA CCACTGGGTA GCCCGGGAGC TGGAGGCCCA CGAGCACGTG
GTGGTCCTGG GCGACTTCAA CATCGCGCCG CAGGCGGCGG ACGTCCACGA CCCCGCCGAA
TGGGAGGGCA AGGTCCTGTT CAGTCAGTCG GAGCGGGATG CGCTCCGCGG GCTGCTCAAT
CTGGGACTGG TTGACACCTT TCGGCTGTTC GAGCAGCCCG AGGGGCAGTT CTCCTGGTGG
GACTACCGGG TCAACAGCTT CAAGCGCAAC CGCGGCCTGC GTATCGATCT GATCCTGGCC
AGCAGCGCCC TGGCGCGGGC CTGTGTCGCC TCCCGTGTGG ATGTCGAGCC GCGCCGCTGG
GAACGCCCGT CGGATCACGC CCCGGTGGTG GCCGAGTTCG ACCCCGTGGT GCTGGGGGGT
GCCGAGGGCG AGAGGTCGGC ATGA
 
Protein sequence
MKIASWNVNS LKVRLPQVKA WAQSATPSVI ALQETKVPDD QFPLKALQEA GYRAAFAGQR 
TYNGVAVLAR SAPQDVVTDL PGFADTQRRV LACTVSGVRV INLYVPNGQE VGSEKYGYKL
RWLEALHHWV ARELEAHEHV VVLGDFNIAP QAADVHDPAE WEGKVLFSQS ERDALRGLLN
LGLVDTFRLF EQPEGQFSWW DYRVNSFKRN RGLRIDLILA SSALARACVA SRVDVEPRRW
ERPSDHAPVV AEFDPVVLGG AEGERSA