| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2267 |
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| Symbol | |
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| ID | 4709478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2487434 |
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| End bp | 2489671 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639856743 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001003833 |
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| Protein GI | 121999046 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCCCC AGGGCGGTCA CCCCCAAGGG GCGGGCGCGC CGCCCATCCT TCAGGTGGCG
GTGCCCCGTC CCCTGCAAGA GGCGCTGGAC TATCGACCAC CCCCCGGCGC CTGGCCGGCT
GAACCGGTGG GGTGCCGGGT CGAGGTCCCC CTGGGCCGCA GCCGCGCGGT GGGTATTGTG
GTGGCGGTTC GCCACAGCTC GGATCTACCG GCATCGCGCT TGCGCGCCGC CAGCGCCTGG
GTGGATGAGC AGCCGCTGCT CGATACGGAA CTGCTGGAGA CGCTCACCTG GGCGGCGCGC
TACTACCGCT ATCCGCTGGG CACAGCCCTG GCTACCGCGC TGCCGGGCCC ACTGCGTCAG
GGCCGGCCGG CCCGAAGGGC CGTGGCCTGG TGGCGCCTGG ACGCGCGGCT GCACGAGGAC
GATCGTGCGG TGCGCCGGGC GCCGCGGCAG GCAGAGCTGC GCCGCCGACT GCTGGCATCG
GGGGGCGCGG CGCCATACGC GTTGCTGGTG GCGGAGCAGC CGGCCTGGCA GCGGGCCGGC
CGCCTCCTTG AGCAGGCCGG TCTGCTCCAC CGCGAGTATC ACCCGGCCCA GGCCGAGGGC
AGCGCGGACC GGACGCCGCG CCCCGGGCCG GAGCTCGACG CCGACCAACA GCAGGCCCTG
GAGTGCATGC TCGCCGCCGA CGGCTACGCG GCCTTCCTGC TTGAGGGCGT GACCGGCAGC
GGCAAGACCG AGGTCTATCT GCAGACGGCC GCTCGGGCCC TGGCGGCGGG GCGGCAGGTG
CTCATCCTGG TGCCCGAGAT CGGCCTGGCC CCGCAGTTCC TGGAGCGTCT GCGCGAGCGC
CTGAGCGGCT CGGTGGTTGT GCTCCATTCC GGGCTGTCCG GCACCGACCG TGCCGAGGCC
TGGCTGGCGG CCCGAGACGG CGACGCGGCG GTGATCCTGG GGACCCGCTC GGCGATCTTC
ACCCCGCTGC CCCGTCCGGG ACTGATCGTG GTCGACGAGG AGCACGACCC TTCGCTGGCC
CAGCAGGACG GCTTCCGCTA TTCGGCGCGG GATCTGGCCG TGCTGCGGGC TCGCACCCTG
GATGTGCCGG TGGTACTCGG CTCTGCGACC CCGTCGCTGG AGTCGCTGCA CAATGCCCGC
GGCGCTCGGT ATACCCATCT GCGCCTGCCC CATCGGGCGG GGCTGGCCCG CGCTCCGAGT
GTGCAGCTGG TCGACATCCG CAGCCGCCGC CTCGTCGGCG GCATTTCGGC ACCGCTGCAG
GAGGCGGTGC GCCGGCACCT GGATGCCGGG TCGCAGGTCC TGTTGTTCCT CAACCGGCGC
GGATACGCCC CGGTGCTGAT CTGCCACGCC TGTGGCTGGG TCGCCGGGTG CCACCGCTGC
GATGCGCGGC TGACCTACCA CCGCAGCCGC GCCCAGCTGC GCTGCCACCA CTGCGGCCAT
ACCGCGCGCG TGCCCGCGGC CTGTCCGGAG TGCGGCGAGG CCGACCTGCG TCCCTTGGGG
CCGGGGACGG AACGCCTTGA GGAGGCGCTC GCCGAGCTCT TCCCCGGGGT GGGCCAGCTG
CGGATTGATC GGGATACCAC CCGCCGCCGC GGAGCGTTAG AGGCCCAGCT GGCGGCGGCG
CACCGCGGCG ACGCGCAACT GCTCATCGGC ACGCAGATGC TCGCCAAGGG GCACCACCTG
CCGGCGGTCA CCCTGGTGGC GGTGATCGAC GTCGATCAGG GGCTGTTCGG TGCGGACTTC
CGGGCCACCG AGCGGTTGGC CCAGCTGGTC GTGCAGGTGG CCGGGCGTGC CGGGCGTGGG
GAGCAGCCCG GCGAGGTGTT ACTGCAGACG CGCCACCCGG AGCACCCGAT GTTGCGCACG
CTGCTGGAGC GCGGCTATCC GGCCTTTGCC GAGGCGCACC TGGCCGAGCG CCAGGCGGCC
GGACTGCCGC CCTATGCGGC GCTGGCCCTG TTGCGCGCCG AGTCGGTGCA CGCCGACGCC
CCCTATCTGT TCCTTGAGTC GGCGGCGCAG TATGGTCGAA GCCGGCTCGG GAAGGGGGGC
GGGGTGGAGC TGCTCGGCCC GGTGCCGGCC CCCATGGAGC GGCGGGAAGG TCGCCACCGG
GCGCAGCTGA TGGTCCGTGC CGAGCGGCGC ATCGACCTGC AGCGCTTCCT GGTGGCGTGG
AGCGGTGGGC TCGGCAGCCT GGAGGGGGCC CGACAGGTTC GCTGGTCGCT TGACGTGGAT
CCGGTGGAGA TGGTCTGA
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| Protein sequence | MPPQGGHPQG AGAPPILQVA VPRPLQEALD YRPPPGAWPA EPVGCRVEVP LGRSRAVGIV
VAVRHSSDLP ASRLRAASAW VDEQPLLDTE LLETLTWAAR YYRYPLGTAL ATALPGPLRQ
GRPARRAVAW WRLDARLHED DRAVRRAPRQ AELRRRLLAS GGAAPYALLV AEQPAWQRAG
RLLEQAGLLH REYHPAQAEG SADRTPRPGP ELDADQQQAL ECMLAADGYA AFLLEGVTGS
GKTEVYLQTA ARALAAGRQV LILVPEIGLA PQFLERLRER LSGSVVVLHS GLSGTDRAEA
WLAARDGDAA VILGTRSAIF TPLPRPGLIV VDEEHDPSLA QQDGFRYSAR DLAVLRARTL
DVPVVLGSAT PSLESLHNAR GARYTHLRLP HRAGLARAPS VQLVDIRSRR LVGGISAPLQ
EAVRRHLDAG SQVLLFLNRR GYAPVLICHA CGWVAGCHRC DARLTYHRSR AQLRCHHCGH
TARVPAACPE CGEADLRPLG PGTERLEEAL AELFPGVGQL RIDRDTTRRR GALEAQLAAA
HRGDAQLLIG TQMLAKGHHL PAVTLVAVID VDQGLFGADF RATERLAQLV VQVAGRAGRG
EQPGEVLLQT RHPEHPMLRT LLERGYPAFA EAHLAERQAA GLPPYAALAL LRAESVHADA
PYLFLESAAQ YGRSRLGKGG GVELLGPVPA PMERREGRHR AQLMVRAERR IDLQRFLVAW
SGGLGSLEGA RQVRWSLDVD PVEMV
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