Gene Hhal_2212 details

Gene Information

• Locus tag: Hhal_2212
• ID: 4709544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2427257
• End bp: 2427871
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639856687
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001003778
• Protein GI: 121998991
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCCC GGCTGCGCGG CACACTGCTG GAGAAGCGCC CGCCCACACT GGTGGTCGAG 
GCGAACGGGC TCGGCTATGA GGTCGAGGCG CCGCTATCCA CCATCGAGGC CCTGCCGGAG 
ACCGGCCGGG AGGTTATCCT GCATACCCAC CTCAGCGTCC GCGAGGACGG ACAGACGCTG 
TTCGGCTTCC GCACCCGCGC CGAACGGGAC CTGTTCCGGC GGCTGATCCG CGTCTCCGGC 
GTCGGGCCGA AGCTGGGTCT GGCCCTGCTC TCCGGCGTGG ACGGCGAAGA GCTGGTGCGC 
TGCGTCCGTG ACGACGACCC CAAGCGGCTC ACCCAGGTCC CGGGGATCGG CCGCAAGACC 
GCCGAACGAC TCATCGTCGA GCTGCGTGAT CGGCTAGACG GGGTGGGCGG CGGGTCCACG 
GCCGCGCCCG CTGCGGGCGC GGACCACCCC ACCGGGGAGA ACGACCCGGT GAGCGAGGCC 
ATCGAGGGCC TGGTCGCCCT GGGCTACAAG CCGCCCGAGG CGGCGCGCAT GGCCCGCAAC 
GCGGCAGAGC CGGAGCTCGG CTGCGAGGCG ATCATCCGGC GTGCGCTGCA GCGCGCCGTG 
CCGCGAGGGG GGTGA 

 

Protein sequence

MIARLRGTLL EKRPPTLVVE ANGLGYEVEA PLSTIEALPE TGREVILHTH LSVREDGQTL 
FGFRTRAERD LFRRLIRVSG VGPKLGLALL SGVDGEELVR CVRDDDPKRL TQVPGIGRKT 
AERLIVELRD RLDGVGGGST AAPAAGADHP TGENDPVSEA IEGLVALGYK PPEAARMARN 
AAEPELGCEA IIRRALQRAV PRGG