Gene Hhal_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2206 
Symbol 
ID4709202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2421237 
End bp2421767 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID639856681 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_001003772 
Protein GI121998985 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000432262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATA CCCGCATCAT CAAGAAGTAT CCCAATCGCC GTCTGTACGA TACGGCGATC 
TCGAGCTACA TCACGCTGGC CGACGTCAAG CGACTGGTGC TGGAGAGCGT CGACTTCCAG
GTGGTCGATG CCAAGACCCG CGAGGACATC ACCCGCAGCA TCCTGCTCCA GATCATCAGC
GAGGAGGAGG AGGAGGGCGA GCCGATCTTC TCCAGCCAGC TGCTGGCCCA GCTCATCCGG
GCCTACGGCG GCAACATGCA GAACATGCTC ACCAGTTACC TGGAGAAGAG CCTGGAGCTC
TGGGCGGATC AGCAGCGCGT CTTCCAGCAG CGCACCCGGG AGTTCATGGA CCACAACCCC
ATGAATATCA TGACCCAGTT CGCTGAGCGC AACCTGGCCC TGTGGCGGCA GATGAGCGGG
CTGGACGGCA CCCGCGACGA AGAAAACAGC GGGTTTGAAG ACCCGCCCGC CTCCAGCCGG
GGCCCGGGGC GCCATCGCCG CGACGAGGAC AGCGAAGGCC CTCAGGGCTG A
 
Protein sequence
MSDTRIIKKY PNRRLYDTAI SSYITLADVK RLVLESVDFQ VVDAKTREDI TRSILLQIIS 
EEEEEGEPIF SSQLLAQLIR AYGGNMQNML TSYLEKSLEL WADQQRVFQQ RTREFMDHNP
MNIMTQFAER NLALWRQMSG LDGTRDEENS GFEDPPASSR GPGRHRRDED SEGPQG