Gene Hhal_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2196 
Symbol 
ID4709286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2407790 
End bp2411689 
Gene Length3900 bp 
Protein Length1299 aa 
Translation table11 
GC content72% 
IMG OID639856671 
Productphosphoribosylformylglycinamidine synthase 
Protein accessionYP_001003762 
Protein GI121998975 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0353893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAGA TCCCCGGAAA ACGCGCCCTC TCTCCCTTTC GCCTCGACAA GCTGCGGGAC 
GAACTCCGTG ACGCCTGTGC TGCGGTGCGC GCCGTCGATG CGACGTACTG CCACTTTGCC
GCCACGTCCC GCCCCCTTTC CGAAGCGCAG CATGAGATCC TGCTGCAGTT GCTCGACTAC
GGCGCCGACT ACCCGGCGCC GTCCGCGGCG GAGGGCGAGG TCACCACGCT CTTGGTGGTG
CCTCGGCCCG GCACCGTTTC TCCCTGGTCG AGCAAGGCCA CGGATATCGC CCGCAACTGC
GGGCTGAGCG ATATCGAACG TATCGAGCGC GGGACCCTGT TTCGCATCAC TACCGACGGC
CCCCTGGAGG GGGCTGCGCG CCAGGCGCTG GTCGCGGCCA TCCACGACCC GCTGACCGAC
GCCGTTCTCG CCGGCCCCGA GGAGGCCGAG GCCCTGTTCC GCGACAGCCA GCCGCGCCCG
GTGGCCGAGG TCGATATCCT CGGTGGTGGC CGCGAGGCGC TGGTCCGGGC CGACGCCGAG
CTGGGCCTGG CGCTGGCCGA GGACGAGATC GATTACCTGC TCGAGAGCTA CGACGGTCTG
GGTCGCAATC CCACCGACGT CGAGCTGATG ATGTTCGCCC AGGCGAACTC GGAGCACTGC
CGACACAAGA TCTTCAATGC CGACTGGGTC ATCGACGGTG AGGGGCAGCC GCAGTCGCTG
TTCGCCATGA TCCGGCGCAG TCACGAGGCC AGCCCCGAGG GGGTGCTCTC GGCCTACAGC
GACAACGCCG CCGTGGCCGC CGGCTACGAC GCCCGGCGCC TGCACGCCGG GGCCGACGGG
TGCTACCGCG AGCACCCGGA GCCGGCCCAT CTGGTGATGA AGGTCGAGAC CCACAACCAC
CCCACCGCCA TCGAGCCCTT TGCCGGCGCC GCTACGGGTG CCGGCGGCGA GATCCGCGAT
GAGGCCGCGA CCGGCATCGG CGGTCGCACC AAGGCAGGGC TGACCGGCTT CTCGGTCTCC
GATCTGCGCA TCCCCGGCTT CCCGCAGCCC TGGGAAGGCC CGGAGGCCCG GCCGCGCCGG
ATCGCCTCTC CGCTGGCGAT CATGCTCGAC GGCCCGCTGG GGGCAGCCGG CTACAACAAC
GAGTTCGGGC GGCCGGCGCT CAGCGGCTAC TTCCGCACCC TGGAGTTGCC GGCCCCCGGC
CCCGGCGGCG GCGAGCAGGT GCGCGGCTAC CACAAGCCGA TCATGATCGC CGGCGGCATG
GGCAACATCC GCGACGCCCA CGTCCACAAG CGCAGCCTCC CGGTGGGGAC GCCGGTGGTG
GTGCTGGGCG GCCCGGCCCT GCTCATCGGC TTGGGCGGCG GGGCCGCCTC GTCGGTGGCC
AGTGGCGCGG GCGATGAGTC GCTGGATCTG GCCTCGGTGC AGCGCGACAA CCCCGAGATG
CAGCGTCGCG CACAGGGTGT GCTGGACGCC TGCACCGCCC GCGGCGAGAC GAACCCGATC
CTGTCGATCC ACGACGTCGG TGCCGGCGGT CTGTCCAACG CCATCCCCGA GATCCTCGAC
GACGCCGACC GCGGTGGACG CATCGAGCTG CGCACTATCC CCATCGACGA CCCGGGTATG
TCGCCGCTGG AGATCTGGTG CAACGAGTCC CAGGAGCGCT ACGTCCTCGC CGTCGATCCC
GAGCGATTGG CCGAGTTCGA GGCCCTGTGT GCCCGCGAGC GCTGCCCCTA CGCGGTGGTC
GGCGAGACCA CCGACGCGCG GGAGTTGGTG GTCGGGGACG GCCACTTCGA CAACACGCCG
GTGGACCTGC CCATGGAGCT GCTCCTGGGC AAGCCGCCGA AGATGCTTCG CGACGTGCGT
CGTCGGCCGG TGGCCGGCGC CCCCCTGGAT CTCGCCGGGG TGACCGTCGC CGAGGCCCTG
GAACGGGTTC TGCAGCTGCC CGCGGTCGCC TCCAAGGAGT TCCTGATCAC CATCGGCGAT
CGCACCGTCA CCGGGCAGGT GGTCCGGGAT CAGATGGTCG GGCCCTGGCA GGTGCCAGTG
GCCGACTGCG CGGTGACAGT CTCCGATTAC CGCGGCTACG CCGGGGAGGC CATGGCGGTG
GGCGAACGGC CCACGGTGGC CATCCTCGAC GCCCCGGCTT CCGGTCGCCT GGCGGTGGCC
GAGGCCCTGA CCAACCTGGC TGCCGCCGGG GTGGGGTCGC TGTCGGCGGT GAACCTCTCC
GCCAACTGGA TGGCCGCCTG CGGCCACGAG GGGGAGGACG CGGCGCTGTA CGACACGGTG
GCCGCCGTCG GTCGGGAGCT CTGCCCCGAG CTGGGGGTCG CCATCCCAGT GGGCAAGGAC
TCGCTGTCCA TGCGCACGGT CTGGGAGGAG GCCGGCGGGC AGCGGAGCGT CACGGCGCCG
GTCTCCCTGG TGGTTTCGGC CTTCGCCCCG GTGGCCGATG TGCGTCGGGC GGTGACGCCG
CAGCTGCAAC CGCAGGACGA CAGCGTGCTG GTCGCCCTGG AGCTCAGCGG CGACCAGCAC
CGGCTGGGCG GCTCGGCCCT GGCGCAGGTC TACCGCCGCG TCGGCGAGCG CCCGGCCGAT
CTGGATAGCC CGGCCGCTTT GCGCTGGGCC TTCGATCGCG TGCAGGGCCT GCTGGCCGAA
GGGCGCGTCC TCGCCTGCCA CGACCGCTCG GACGGCGGTC TGCTGGTCAC CCTCTGCGAG
ATGGCCTTCG CCGGGCGCTG CGGTTTCGAG ATCGATCTGG ACACCCTGGG CGGCGAGGCC
GCGGACCGCC ACCTGGCCGC CGCATTCAGC GAAGAGCCCG GTCTGGTCCT GCAGCTTGCC
ACCGCCGAGG CGGACGCCCT CGAGGCGGCC GCTGCCGAAG CCCCTGAGGG GGTGCGCGTG
CGCCGGCTGG GGCACCCGCG CCCGGATGAC CGCGTGGTGG TCCGCGGCCA GGGCGACGTG
CTGCTGGATC GGTGTCGCCG GGAGCTGCAG CGGCGCTGGG CCGAGACCAG CTATCGCATG
CAGGCCCTGC GCGACGACCC CGAGTGCGCC GCCGAGGCCT TCGACGCCAT CCCGGTCGCC
GACGACCCCG GGCTGACAGC CACTCGGCTG ACCTTCGAGC CGGGCGAGGA CGTGGCGGCT
CCGTACATCG CCACGGGCGC CCGCCCCCGC GTGGCGGTCC TCCGCGAGCA GGGGGTCAAT
GGCCACGTGG AGATGGCGGC GGCCTTCCAT GCCGCCGGGT TCGAGGCCGT GGATGTGCAC
ATGAGCGATA TCCTGTCCGG ACGGGACGAC CTCGGCAGCT ACCACGGTCT CGCGGCCTGT
GGCGGCTTCT CCTTCGGCGA CGTGCTCGGC GCCGGCGGGG GGTGGGCCAA GAGCATCCGC
TTCCACGAGG GCGCCCGGGA GGCCTTCCAC GCCTTCTTCC AGCGCCCCGA TACATTCAGC
CTGGGGGTGT GCAACGGCTG CCAGATGCTG GCCCATCTGC GCGATCTCAT CCCCGGCGCC
GAGGCCTGGC CGCGTTTCGT GCGCAATCGC TCCGAGCAGT TCGAGGGGCG CCTGGCCCTG
GTGGAGGTGC TCGACTCCCC CTCGGTACTG CTGCGCGGCA TGGCCGGCTC GCGGCTCCCG
CTGGCGGTCG CCCATGGCGA GGGGCGGGTG GACTTCGGCG CCGGCGATGC GGACTCGGCC
CGACCGGTGC TTCGCTACAT CGACGGTTAC GGCCAGCCGG CACAGACCTA CCCGGCCAAC
CCCAACGGCT CGGCCGGAGG GGTGACCGGC TTCACCAGCG AAGATGGCCG GGCCACCATC
CTGATGCCCC ACCCCGAGCG GGTCTTCCGA AGCGTGCAGT ACTCCTGGCA TCCGTCGGAG
TGGGGCGAGG ACGGGCCATG GCTGCGCATG TTCCGTAATG CGCGGGCTTG GGTTGGCTGA
 
Protein sequence
MLQIPGKRAL SPFRLDKLRD ELRDACAAVR AVDATYCHFA ATSRPLSEAQ HEILLQLLDY 
GADYPAPSAA EGEVTTLLVV PRPGTVSPWS SKATDIARNC GLSDIERIER GTLFRITTDG
PLEGAARQAL VAAIHDPLTD AVLAGPEEAE ALFRDSQPRP VAEVDILGGG REALVRADAE
LGLALAEDEI DYLLESYDGL GRNPTDVELM MFAQANSEHC RHKIFNADWV IDGEGQPQSL
FAMIRRSHEA SPEGVLSAYS DNAAVAAGYD ARRLHAGADG CYREHPEPAH LVMKVETHNH
PTAIEPFAGA ATGAGGEIRD EAATGIGGRT KAGLTGFSVS DLRIPGFPQP WEGPEARPRR
IASPLAIMLD GPLGAAGYNN EFGRPALSGY FRTLELPAPG PGGGEQVRGY HKPIMIAGGM
GNIRDAHVHK RSLPVGTPVV VLGGPALLIG LGGGAASSVA SGAGDESLDL ASVQRDNPEM
QRRAQGVLDA CTARGETNPI LSIHDVGAGG LSNAIPEILD DADRGGRIEL RTIPIDDPGM
SPLEIWCNES QERYVLAVDP ERLAEFEALC ARERCPYAVV GETTDARELV VGDGHFDNTP
VDLPMELLLG KPPKMLRDVR RRPVAGAPLD LAGVTVAEAL ERVLQLPAVA SKEFLITIGD
RTVTGQVVRD QMVGPWQVPV ADCAVTVSDY RGYAGEAMAV GERPTVAILD APASGRLAVA
EALTNLAAAG VGSLSAVNLS ANWMAACGHE GEDAALYDTV AAVGRELCPE LGVAIPVGKD
SLSMRTVWEE AGGQRSVTAP VSLVVSAFAP VADVRRAVTP QLQPQDDSVL VALELSGDQH
RLGGSALAQV YRRVGERPAD LDSPAALRWA FDRVQGLLAE GRVLACHDRS DGGLLVTLCE
MAFAGRCGFE IDLDTLGGEA ADRHLAAAFS EEPGLVLQLA TAEADALEAA AAEAPEGVRV
RRLGHPRPDD RVVVRGQGDV LLDRCRRELQ RRWAETSYRM QALRDDPECA AEAFDAIPVA
DDPGLTATRL TFEPGEDVAA PYIATGARPR VAVLREQGVN GHVEMAAAFH AAGFEAVDVH
MSDILSGRDD LGSYHGLAAC GGFSFGDVLG AGGGWAKSIR FHEGAREAFH AFFQRPDTFS
LGVCNGCQML AHLRDLIPGA EAWPRFVRNR SEQFEGRLAL VEVLDSPSVL LRGMAGSRLP
LAVAHGEGRV DFGAGDADSA RPVLRYIDGY GQPAQTYPAN PNGSAGGVTG FTSEDGRATI
LMPHPERVFR SVQYSWHPSE WGEDGPWLRM FRNARAWVG