Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2196 |
Symbol | |
ID | 4709286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2407790 |
End bp | 2411689 |
Gene Length | 3900 bp |
Protein Length | 1299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639856671 |
Product | phosphoribosylformylglycinamidine synthase |
Protein accession | YP_001003762 |
Protein GI | 121998975 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0353893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCAGA TCCCCGGAAA ACGCGCCCTC TCTCCCTTTC GCCTCGACAA GCTGCGGGAC GAACTCCGTG ACGCCTGTGC TGCGGTGCGC GCCGTCGATG CGACGTACTG CCACTTTGCC GCCACGTCCC GCCCCCTTTC CGAAGCGCAG CATGAGATCC TGCTGCAGTT GCTCGACTAC GGCGCCGACT ACCCGGCGCC GTCCGCGGCG GAGGGCGAGG TCACCACGCT CTTGGTGGTG CCTCGGCCCG GCACCGTTTC TCCCTGGTCG AGCAAGGCCA CGGATATCGC CCGCAACTGC GGGCTGAGCG ATATCGAACG TATCGAGCGC GGGACCCTGT TTCGCATCAC TACCGACGGC CCCCTGGAGG GGGCTGCGCG CCAGGCGCTG GTCGCGGCCA TCCACGACCC GCTGACCGAC GCCGTTCTCG CCGGCCCCGA GGAGGCCGAG GCCCTGTTCC GCGACAGCCA GCCGCGCCCG GTGGCCGAGG TCGATATCCT CGGTGGTGGC CGCGAGGCGC TGGTCCGGGC CGACGCCGAG CTGGGCCTGG CGCTGGCCGA GGACGAGATC GATTACCTGC TCGAGAGCTA CGACGGTCTG GGTCGCAATC CCACCGACGT CGAGCTGATG ATGTTCGCCC AGGCGAACTC GGAGCACTGC CGACACAAGA TCTTCAATGC CGACTGGGTC ATCGACGGTG AGGGGCAGCC GCAGTCGCTG TTCGCCATGA TCCGGCGCAG TCACGAGGCC AGCCCCGAGG GGGTGCTCTC GGCCTACAGC GACAACGCCG CCGTGGCCGC CGGCTACGAC GCCCGGCGCC TGCACGCCGG GGCCGACGGG TGCTACCGCG AGCACCCGGA GCCGGCCCAT CTGGTGATGA AGGTCGAGAC CCACAACCAC CCCACCGCCA TCGAGCCCTT TGCCGGCGCC GCTACGGGTG CCGGCGGCGA GATCCGCGAT GAGGCCGCGA CCGGCATCGG CGGTCGCACC AAGGCAGGGC TGACCGGCTT CTCGGTCTCC GATCTGCGCA TCCCCGGCTT CCCGCAGCCC TGGGAAGGCC CGGAGGCCCG GCCGCGCCGG ATCGCCTCTC CGCTGGCGAT CATGCTCGAC GGCCCGCTGG GGGCAGCCGG CTACAACAAC GAGTTCGGGC GGCCGGCGCT CAGCGGCTAC TTCCGCACCC TGGAGTTGCC GGCCCCCGGC CCCGGCGGCG GCGAGCAGGT GCGCGGCTAC CACAAGCCGA TCATGATCGC CGGCGGCATG GGCAACATCC GCGACGCCCA CGTCCACAAG CGCAGCCTCC CGGTGGGGAC GCCGGTGGTG GTGCTGGGCG GCCCGGCCCT GCTCATCGGC TTGGGCGGCG GGGCCGCCTC GTCGGTGGCC AGTGGCGCGG GCGATGAGTC GCTGGATCTG GCCTCGGTGC AGCGCGACAA CCCCGAGATG CAGCGTCGCG CACAGGGTGT GCTGGACGCC TGCACCGCCC GCGGCGAGAC GAACCCGATC CTGTCGATCC ACGACGTCGG TGCCGGCGGT CTGTCCAACG CCATCCCCGA GATCCTCGAC GACGCCGACC GCGGTGGACG CATCGAGCTG CGCACTATCC CCATCGACGA CCCGGGTATG TCGCCGCTGG AGATCTGGTG CAACGAGTCC CAGGAGCGCT ACGTCCTCGC CGTCGATCCC GAGCGATTGG CCGAGTTCGA GGCCCTGTGT GCCCGCGAGC GCTGCCCCTA CGCGGTGGTC GGCGAGACCA CCGACGCGCG GGAGTTGGTG GTCGGGGACG GCCACTTCGA CAACACGCCG GTGGACCTGC CCATGGAGCT GCTCCTGGGC AAGCCGCCGA AGATGCTTCG CGACGTGCGT CGTCGGCCGG TGGCCGGCGC CCCCCTGGAT CTCGCCGGGG TGACCGTCGC CGAGGCCCTG GAACGGGTTC TGCAGCTGCC CGCGGTCGCC TCCAAGGAGT TCCTGATCAC CATCGGCGAT CGCACCGTCA CCGGGCAGGT GGTCCGGGAT CAGATGGTCG GGCCCTGGCA GGTGCCAGTG GCCGACTGCG CGGTGACAGT CTCCGATTAC CGCGGCTACG CCGGGGAGGC CATGGCGGTG GGCGAACGGC CCACGGTGGC CATCCTCGAC GCCCCGGCTT CCGGTCGCCT GGCGGTGGCC GAGGCCCTGA CCAACCTGGC TGCCGCCGGG GTGGGGTCGC TGTCGGCGGT GAACCTCTCC GCCAACTGGA TGGCCGCCTG CGGCCACGAG GGGGAGGACG CGGCGCTGTA CGACACGGTG GCCGCCGTCG GTCGGGAGCT CTGCCCCGAG CTGGGGGTCG CCATCCCAGT GGGCAAGGAC TCGCTGTCCA TGCGCACGGT CTGGGAGGAG GCCGGCGGGC AGCGGAGCGT CACGGCGCCG GTCTCCCTGG TGGTTTCGGC CTTCGCCCCG GTGGCCGATG TGCGTCGGGC GGTGACGCCG CAGCTGCAAC CGCAGGACGA CAGCGTGCTG GTCGCCCTGG AGCTCAGCGG CGACCAGCAC CGGCTGGGCG GCTCGGCCCT GGCGCAGGTC TACCGCCGCG TCGGCGAGCG CCCGGCCGAT CTGGATAGCC CGGCCGCTTT GCGCTGGGCC TTCGATCGCG TGCAGGGCCT GCTGGCCGAA GGGCGCGTCC TCGCCTGCCA CGACCGCTCG GACGGCGGTC TGCTGGTCAC CCTCTGCGAG ATGGCCTTCG CCGGGCGCTG CGGTTTCGAG ATCGATCTGG ACACCCTGGG CGGCGAGGCC GCGGACCGCC ACCTGGCCGC CGCATTCAGC GAAGAGCCCG GTCTGGTCCT GCAGCTTGCC ACCGCCGAGG CGGACGCCCT CGAGGCGGCC GCTGCCGAAG CCCCTGAGGG GGTGCGCGTG CGCCGGCTGG GGCACCCGCG CCCGGATGAC CGCGTGGTGG TCCGCGGCCA GGGCGACGTG CTGCTGGATC GGTGTCGCCG GGAGCTGCAG CGGCGCTGGG CCGAGACCAG CTATCGCATG CAGGCCCTGC GCGACGACCC CGAGTGCGCC GCCGAGGCCT TCGACGCCAT CCCGGTCGCC GACGACCCCG GGCTGACAGC CACTCGGCTG ACCTTCGAGC CGGGCGAGGA CGTGGCGGCT CCGTACATCG CCACGGGCGC CCGCCCCCGC GTGGCGGTCC TCCGCGAGCA GGGGGTCAAT GGCCACGTGG AGATGGCGGC GGCCTTCCAT GCCGCCGGGT TCGAGGCCGT GGATGTGCAC ATGAGCGATA TCCTGTCCGG ACGGGACGAC CTCGGCAGCT ACCACGGTCT CGCGGCCTGT GGCGGCTTCT CCTTCGGCGA CGTGCTCGGC GCCGGCGGGG GGTGGGCCAA GAGCATCCGC TTCCACGAGG GCGCCCGGGA GGCCTTCCAC GCCTTCTTCC AGCGCCCCGA TACATTCAGC CTGGGGGTGT GCAACGGCTG CCAGATGCTG GCCCATCTGC GCGATCTCAT CCCCGGCGCC GAGGCCTGGC CGCGTTTCGT GCGCAATCGC TCCGAGCAGT TCGAGGGGCG CCTGGCCCTG GTGGAGGTGC TCGACTCCCC CTCGGTACTG CTGCGCGGCA TGGCCGGCTC GCGGCTCCCG CTGGCGGTCG CCCATGGCGA GGGGCGGGTG GACTTCGGCG CCGGCGATGC GGACTCGGCC CGACCGGTGC TTCGCTACAT CGACGGTTAC GGCCAGCCGG CACAGACCTA CCCGGCCAAC CCCAACGGCT CGGCCGGAGG GGTGACCGGC TTCACCAGCG AAGATGGCCG GGCCACCATC CTGATGCCCC ACCCCGAGCG GGTCTTCCGA AGCGTGCAGT ACTCCTGGCA TCCGTCGGAG TGGGGCGAGG ACGGGCCATG GCTGCGCATG TTCCGTAATG CGCGGGCTTG GGTTGGCTGA
|
Protein sequence | MLQIPGKRAL SPFRLDKLRD ELRDACAAVR AVDATYCHFA ATSRPLSEAQ HEILLQLLDY GADYPAPSAA EGEVTTLLVV PRPGTVSPWS SKATDIARNC GLSDIERIER GTLFRITTDG PLEGAARQAL VAAIHDPLTD AVLAGPEEAE ALFRDSQPRP VAEVDILGGG REALVRADAE LGLALAEDEI DYLLESYDGL GRNPTDVELM MFAQANSEHC RHKIFNADWV IDGEGQPQSL FAMIRRSHEA SPEGVLSAYS DNAAVAAGYD ARRLHAGADG CYREHPEPAH LVMKVETHNH PTAIEPFAGA ATGAGGEIRD EAATGIGGRT KAGLTGFSVS DLRIPGFPQP WEGPEARPRR IASPLAIMLD GPLGAAGYNN EFGRPALSGY FRTLELPAPG PGGGEQVRGY HKPIMIAGGM GNIRDAHVHK RSLPVGTPVV VLGGPALLIG LGGGAASSVA SGAGDESLDL ASVQRDNPEM QRRAQGVLDA CTARGETNPI LSIHDVGAGG LSNAIPEILD DADRGGRIEL RTIPIDDPGM SPLEIWCNES QERYVLAVDP ERLAEFEALC ARERCPYAVV GETTDARELV VGDGHFDNTP VDLPMELLLG KPPKMLRDVR RRPVAGAPLD LAGVTVAEAL ERVLQLPAVA SKEFLITIGD RTVTGQVVRD QMVGPWQVPV ADCAVTVSDY RGYAGEAMAV GERPTVAILD APASGRLAVA EALTNLAAAG VGSLSAVNLS ANWMAACGHE GEDAALYDTV AAVGRELCPE LGVAIPVGKD SLSMRTVWEE AGGQRSVTAP VSLVVSAFAP VADVRRAVTP QLQPQDDSVL VALELSGDQH RLGGSALAQV YRRVGERPAD LDSPAALRWA FDRVQGLLAE GRVLACHDRS DGGLLVTLCE MAFAGRCGFE IDLDTLGGEA ADRHLAAAFS EEPGLVLQLA TAEADALEAA AAEAPEGVRV RRLGHPRPDD RVVVRGQGDV LLDRCRRELQ RRWAETSYRM QALRDDPECA AEAFDAIPVA DDPGLTATRL TFEPGEDVAA PYIATGARPR VAVLREQGVN GHVEMAAAFH AAGFEAVDVH MSDILSGRDD LGSYHGLAAC GGFSFGDVLG AGGGWAKSIR FHEGAREAFH AFFQRPDTFS LGVCNGCQML AHLRDLIPGA EAWPRFVRNR SEQFEGRLAL VEVLDSPSVL LRGMAGSRLP LAVAHGEGRV DFGAGDADSA RPVLRYIDGY GQPAQTYPAN PNGSAGGVTG FTSEDGRATI LMPHPERVFR SVQYSWHPSE WGEDGPWLRM FRNARAWVG
|
| |