Gene Hhal_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2168 
Symbol 
ID4709713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2382025 
End bp2382387 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content63% 
IMG OID639856643 
Productresponse regulator receiver protein 
Protein accessionYP_001003734 
Protein GI121998947 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.747517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA TCCTGGCGGT CGATGATTCC GCCTCCATGC GGCAGATGGT GACCTACACC 
CTCAAGCAGC AGGGCTACGA GGTCACCGAG GCGGTGGATG GCACGGACGC ATTGACCAAG
GCCAAGGCGG GTGGCTTCGA CCTGGTCATC ACGGACGTCA ACATGCCGAA GATGGACGGT
ATCACCCTGG TCCGTGAGCT ACGTGGACTG CCCGCTTTCA AGTTCACGCC GATCCTGCTG
CTGACCACCG AGTCGGCGCC GGAGAAGAAG CAGGAGGGCA AGGCGGCCGG GGCGACCGGG
TGGTTGGTCA AGCCCTTCGA CCCGGATCAG CTGGTCAACA CCATCAAGAA GGTGGTGCGC
TGA
 
Protein sequence
MAKILAVDDS ASMRQMVTYT LKQQGYEVTE AVDGTDALTK AKAGGFDLVI TDVNMPKMDG 
ITLVRELRGL PAFKFTPILL LTTESAPEKK QEGKAAGATG WLVKPFDPDQ LVNTIKKVVR