Gene Hhal_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2108 
Symbol 
ID4709922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2312492 
End bp2313724 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content62% 
IMG OID639856582 
Productcytochrome b/b6 domain-containing protein 
Protein accessionYP_001003674 
Protein GI121998887 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0919786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGTC TCAATCTCAG CGGTCTGCAG CAGTGGATCG ATGACCGCTA TCCCATGACG 
AGTACTTGGC GGTACCACAT GACCGAGTAC TACGTCCCCA AGAACGTCAA CTGGTGGTAC
CTGTTCGGAT CGCTCTCGAT CCTGGTCCTT GTGATCCAGA TCGTGTCCGG CATCTGGCTG
ATGTTCTACT ACCAGCCCTC CGTCGAGCGC GCGTTCTCCT CCGTGGAGTT CATCATGCGC
GACGTGGACT GGGGCTGGTT GATGCGCTAC ATGCACACGA CGGGCGCGTC GGCGTTCTTC
CTGGTTGTGT ATCTGCACAT GTACCGAGGG CTGCTCTACG GCTCTTATAA GAAGCCGCGT
GAGCTGCTCT GGATCACCGG TGTGCTGATC TACCTGGTCA TGATGACCGA GGCGTTCATG
GGCTACGTCC TGCCCTGGGG GCAGATGTCC TACTGGGCGG CGCAGGTGAT CATCGCGCTG
GCTGGTGTGA TCCCGGTGGT CGGTGACGAG CTGGTGGTCT GGCTTCAGGG CGGCTTCGTC
GTCAACGAGG CGACGCTCGG CCGGCTCTTC GCCCTCCACG TGGTGGCGCT GCCGCTGGTC
CTGATCGCGC TGGTGTTCGT GCATATCGTT GCACTGCACC ACGTCGGCTC CAGCAGTCCT
GACGGCGTCG AGATCAAGCA GAACAAGGAT GAGAACGGCA AGCCCATCGA CGGCGTTGGC
TTCCACCCCT ACGTCGTGGC CAAGGACATG TTCGGCTGGG GCATCTTCCT GATCCTGTTC
TGCGCGGTGA TGTTCTTCGC CCCGACCTTC GGCGGCTACT TCATCGAGGC GCCGAACTTC
CAGGAGGCGA ATCCGCTGCA GACGCCCGAG GTGATCCACC CGATCTGGTA CTTCACGGCG
TGGTACGCCA TGCTGCAGTC GATCCCGAGC GAGGCCCTGG GCGTGATTGT CATGCTGGCG
GCGCCGGGCA TCCTGCTGTT CCTGCCCTGG ATCGACCGCA GTCCGGTGAA GTCCATCCGC
TACCGCGGTC TCGGCTTCAA GGTCGCGCTG GCTGCCTTCA CGGTGTCCTT CCTGGTGCTG
ACCTGGGCCG GCATGGAGGA GCCCACGGGT CTGCCGATCC TGTTGAGCCA GATCTCGACC
GTGATCTACT TCGGGTTCTT CGTCTTCCTC TGGGCCTACA CCTACTTCGG GTTCGAGAAG
ACGAAGCCTG TTCCGGAAAG GGTGACCGTC TGA
 
Protein sequence
MNRLNLSGLQ QWIDDRYPMT STWRYHMTEY YVPKNVNWWY LFGSLSILVL VIQIVSGIWL 
MFYYQPSVER AFSSVEFIMR DVDWGWLMRY MHTTGASAFF LVVYLHMYRG LLYGSYKKPR
ELLWITGVLI YLVMMTEAFM GYVLPWGQMS YWAAQVIIAL AGVIPVVGDE LVVWLQGGFV
VNEATLGRLF ALHVVALPLV LIALVFVHIV ALHHVGSSSP DGVEIKQNKD ENGKPIDGVG
FHPYVVAKDM FGWGIFLILF CAVMFFAPTF GGYFIEAPNF QEANPLQTPE VIHPIWYFTA
WYAMLQSIPS EALGVIVMLA APGILLFLPW IDRSPVKSIR YRGLGFKVAL AAFTVSFLVL
TWAGMEEPTG LPILLSQIST VIYFGFFVFL WAYTYFGFEK TKPVPERVTV