| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2084 |
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| Symbol | lpxC |
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| ID | 4710088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2287625 |
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| End bp | 2288527 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639856558 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001003650 |
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| Protein GI | 121998863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.122753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTC AACGCACCTT GAAGAACAGC ATCCGCGCGA CCGGCGTGGG CCTGCACACC
GGCGAGAAGG TCTACCTGAC CCTCCGTCCG GCTCCGGCCA ATGCGGGGAT CATATTCCGG
CGCACTGATC TCGACCGCGA GATCAAGGCA ACCGCCGCTG CCGTGGGCGA CACCCGCCTG
TCCACCTGCC TGGTGGAAGA CGGGGTGCGG GTTTCCACCG TCGAGCACCT GCTGTCGGCG
CTGGCCGGGC TGGGGATCGA CAACTGCTAT GTCGATCTCT CCGCGGCCGA GGTGCCGATC
ATGGACGGCA GTGCGGCGCC CTTTGTCTTC CTGGTGCGCT CCGCAGGGAT CAAGGAGCAG
GAGGCGCCCA AGCGCTTCGT GCGCATCCTG GAGCCGGTCC AGGTTGTTGA TGGTGACAAG
TGGGTGGCCT TCGAGCCCTT CGAGGGCTTC AAGGTCAGCT TCACCATCGA TTTCGACCAC
CCGGTCTTCC TCGATCAGCA CGCCCGTGCC GAGGTGGATT TCTCCTCGAC CTCCTTCATC
AAGGAGGTCA GCCGTGCGCG GACCTTCGGC TTCATGAAGG AGATCGAGGC CCTGCGGGCC
TCCCGGCTGG CCCTCGGTGG CAGCCTCGAC AACGCCATCG TGGTCGACGA CTACCGGGTG
CTGAACGAGG ACGGGTTGCG GTACCGGGAC GAGTTCGTCA AGCACAAGAT CCTCGACGCC
ATCGGCGACC TTTACCTCTT GGGTAGCAGC CTGATCGGCT CGTTCCACGG GCACAAGTCC
GGGCACGCCC TCAATAACCG CCTCCTGCGC AAGCTGCTCG AGCACGAGCA CGCCTGGGAG
GAGGTGACCT TTGAGGAGCT GGACGAATTG CCCATCGCCT ACGATCAGCC GGTGGTGGCC
TGA
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| Protein sequence | MIRQRTLKNS IRATGVGLHT GEKVYLTLRP APANAGIIFR RTDLDREIKA TAAAVGDTRL
STCLVEDGVR VSTVEHLLSA LAGLGIDNCY VDLSAAEVPI MDGSAAPFVF LVRSAGIKEQ
EAPKRFVRIL EPVQVVDGDK WVAFEPFEGF KVSFTIDFDH PVFLDQHARA EVDFSSTSFI
KEVSRARTFG FMKEIEALRA SRLALGGSLD NAIVVDDYRV LNEDGLRYRD EFVKHKILDA
IGDLYLLGSS LIGSFHGHKS GHALNNRLLR KLLEHEHAWE EVTFEELDEL PIAYDQPVVA
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