Gene Hhal_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2001 
Symbol 
ID4711138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2206377 
End bp2206673 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content66% 
IMG OID639856474 
ProductFis family transcriptional regulator 
Protein accessionYP_001003567 
Protein GI121998780 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0124227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGG GCAAGGGACC CGGTCCCGGA CAGGGTCCTG GCAGGGGCGG TGACGGCGCG 
GTGGGGGGAC CCATCCGCGA GGCGGTGACC CGCGCCCTGG ATGACTATTT CAGGGAGTTG
GACGGGCACG ACTGCAACGG TCTTTACCGG CTTGTGCTCA ACGAGGTGGA GGTCCCGCTC
CTGGAGTCGG TGATGGACTA CTGCTCTGGC AACCAGACGC GGGCGGCTCA GCTGCTCGGC
CTCAATCGAG CCACGCTGCG CAAGAAGCTC CGTGAACACG GCATCGACTA CAACTGA
 
Protein sequence
MHEGKGPGPG QGPGRGGDGA VGGPIREAVT RALDDYFREL DGHDCNGLYR LVLNEVEVPL 
LESVMDYCSG NQTRAAQLLG LNRATLRKKL REHGIDYN