Gene Hhal_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1963 
Symbol 
ID4710346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2159092 
End bp2160492 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content72% 
IMG OID639856436 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001003529 
Protein GI121998742 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAC CCCCCGCCCG GCTCTACCTT TCGGCCCTGC ACAAGGGGTC CGGCAAGACC 
TCCCTGAGCG TCGGGCTCGC CGGGGCCCTA AACCGCCGGG GGCTCGCCGT CCACCCCTAC
AAGCGGGGCC CGGACTACAT CGACCCCGGC TGGCTGACCC TCGCCAGCGG CCGGCCGTGC
CGGAACCTCG ACTACCACAC CATGGAGTGC GACGAGATCC GGGCCGAAGT CGCCGCGGCG
GATGGCGACC TGGCCCTGAT CGAGGGCAAC AAGGGGCTGC ACGACGGCCT CGACCCCGAC
GGCCGCGACA GCAACGCCGC CCTGGCGGCG GAGTTGCAAG CCCCCATCGT GCTGATCGTG
GACGCCCGTG GCATGACCCG CGGGATCGCC CCCACGGTCC TCGGCCACGC CGGCTTCGAC
CCGCAGGCCC CGGTTGCCGG CGTGATCCTC AACCGCGTCG GCGGGGCACG CCACGAGCGC
AAGCTGCGCC AGGCACTGGA GCGGTACACC GACCTCCCGG TGCTCGGCGC CGTGCCCAAT
CACCCCGAGC TGCACATCGA GGCGCCTTAC CTGGGCCTCA TCCCGGCGGC GGAGCAGGAA
CGGGCCCAGG GGATCGTCGA CCTGTGGGCC GACCGGGCCG AGGCGCACCT CGACCTGGAA
GGTCTCCGGG AGCTGGCGGC GACCGCCCCG CCGCTCCACG CCCCGGCCCA GCCGAACACC
GCAGCGAGGA GGGCCGACGT CGACATCGGC ATCGCCCACG ACCGCGCGTT CAACTTCTAC
TACCCCGGCG ACCTGGAGGC CCTGGAGCGC GCCGGTGCCC GACTCCGCTG GATCGACCTG
ACCGCTGACA CCGAACTTCC TGCCGTGGAC GGGCTCATCA TCGGCGGTGG CTTCCCGGAA
CGCCACGCCG CGGAACTCGC TGCCAACCAC GCGATGAAGC GGGCGGTGGC CGAGGCCTCC
GCCGCGGGCC TGCCGATCTA CGCCGAGTGC GGCGGACTGC TTTACCTGTG CCGGCGACTG
AACACCGGGG ACGGCCATCA CATCATGGCC GGTGTCTTCC CGCTGGATGC GGAGATGACC
GGCCGTCCCC AGGGCCACGG GTACATGACC CTGCAGACCA CGCCGGAGAC CCCCTGGAGT
CCGGCGCCCG GGACGACGGC CCTGCCCGCC CACGAATTCC ACTACTCCAG ACTGCGCGAG
CCGGTGCCTG AGGAACTCCC CTGTGCCTAT CGGGTCACCC GCGGGCAGGG GCTCGGCGGG
TGCCGCGATG GGCTGATCAA GGGCAATACC GTCGCCTCCT ACGCCCACCT GCGCCACACC
TGGACCACCC CCTGGGCCGA GCGATTCGTG GCCTTCGTGC GGGAGCAGAG GCGAAGCGCG
GCACCGACCG CCCCTTGCTG A
 
Protein sequence
MTRPPARLYL SALHKGSGKT SLSVGLAGAL NRRGLAVHPY KRGPDYIDPG WLTLASGRPC 
RNLDYHTMEC DEIRAEVAAA DGDLALIEGN KGLHDGLDPD GRDSNAALAA ELQAPIVLIV
DARGMTRGIA PTVLGHAGFD PQAPVAGVIL NRVGGARHER KLRQALERYT DLPVLGAVPN
HPELHIEAPY LGLIPAAEQE RAQGIVDLWA DRAEAHLDLE GLRELAATAP PLHAPAQPNT
AARRADVDIG IAHDRAFNFY YPGDLEALER AGARLRWIDL TADTELPAVD GLIIGGGFPE
RHAAELAANH AMKRAVAEAS AAGLPIYAEC GGLLYLCRRL NTGDGHHIMA GVFPLDAEMT
GRPQGHGYMT LQTTPETPWS PAPGTTALPA HEFHYSRLRE PVPEELPCAY RVTRGQGLGG
CRDGLIKGNT VASYAHLRHT WTTPWAERFV AFVREQRRSA APTAPC