Gene Hhal_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1935 
Symbol 
ID4710615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2133015 
End bp2133728 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID639856408 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001003501 
Protein GI121998714 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGG GACTGGTCAT CGATCTCGAT ACCTGCGTCG GGTGCCACGC CTGCGTCGTG 
GCGTGCAAGC AGTGGAACAC CTCGGGGACG GTGGGCCCGC TCACCGACTA CCACCCCTAC
GGCGAGGCTC CCAGTGGGGT GATGCTCAAC CGCGTGCGCC ACTACGAGGA GGGCACCTAT
CCGAACAGCA AGACCGTCAA CGTGCCGGTC TCCTGCATGC ACTGCGATGA CCCGCCGTGC
GTCGATGTCT GTCCCACCGG GGCGTCTTAC AAGCGGGACG CCGACGGGAT CGTGCTGGTC
GATGAGACCA AGTGCATGGG CTGCAACTAC TGCGCCTGGG CCTGCCCCTA CGGCTGCCGG
GAGCTCGACG GCGCCAGCGG CACGATGAAG AAGTGCACGC TGTGCATCGA CCGGATCTAC
GACGATCGCC TCCCGGAAGA CGAGCGCCAG CCCGCCTGCG TGCTCTCCTG TCCAGCCCGG
GCGCGGCACT TCGGCGACCT TGACGACCCG GATTCTCGGG TCAGCCAGCT GGTGCGGGAG
CGCCGTGGCT TCGTGATGCT CCCGGAGATG GGGTGTCAGC CGGTCAACCA CTACCTGCCG
TTGCGGCCGC CCCAGGCCAG CCGCCCGCTG CCCGAGGCGG CCGACCCGCC GCGGCAGGCG
GCGGCCGACC CGGCAACGGT GCAGCACTGG ACCAATCGCG TCGTTCACCG CTGA
 
Protein sequence
MRLGLVIDLD TCVGCHACVV ACKQWNTSGT VGPLTDYHPY GEAPSGVMLN RVRHYEEGTY 
PNSKTVNVPV SCMHCDDPPC VDVCPTGASY KRDADGIVLV DETKCMGCNY CAWACPYGCR
ELDGASGTMK KCTLCIDRIY DDRLPEDERQ PACVLSCPAR ARHFGDLDDP DSRVSQLVRE
RRGFVMLPEM GCQPVNHYLP LRPPQASRPL PEAADPPRQA AADPATVQHW TNRVVHR