| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1932 |
|---|
| Symbol | |
|---|
| ID | 4710781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 2129147 |
|---|
| End bp | 2130358 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639856405 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001003498 |
|---|
| Protein GI | 121998711 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.516166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATA CGCTCAAGAC CGCCTGGACC CCCGCCGTCG CCTGGGAGCA GCTGCTCGGC
GGCGGACCGC TGTTCATCCT GGACGTGCGC AACCCCGACG AGTTCGAGCG CTGGCGCGTC
GAGGGCCCGC ACGATACCCC GACGCTCAAC GCCCCCTACT TCGAGCTGCT CGACCTCGAC
GACGAGGACG AAGACGTGAA TGCCGCCGTT CTCCGGGGCG TTCGACAGCA GCTGACCCAC
CAACTCCCCA ATGACCGCAC CATCCTGACG GTCTGCGGCG AGGGCCACAC CTCGGAGCAC
CTGGCCGATG GCCTGCGCGA ACTCGGCTAC CCGGCCCTGA ACCTCGAGGG CGGCATGGAG
GCCTGGGGCG ACTTCTACTA CCACCGGGTG GTGGGTAACC ACGAACGCTA CACCGTCTAC
CAAGTAGTCC GCCCCGCCCG CGGTGATCTC AGCCACGTGG TCATCAGCGA CGGAGAGGCC
GCCGTCGTCG ACCCGAACCG CCACGTGGAG GTCTACGAGG AGCTGGTCCA CGCACGGGGC
GCACGCATCA CTCAGGTTCT GGATACCCAC GCCCACGCCG ACCACATCAG CGGCGGCCCG
GAGCTGGCCC GACGCCACCG CGTGCCGTAC TACCTGCACC CCTACGACGC CATCCACCCC
ATGGACATGC TGCCGGCACG CATCGACTTC GCGCCGCTCT ACGCTGAACA GCACGTACCC
GTCGGCGGGA TCACCCTGCG CGCCCTGCAC GTCCCCGGCC ACACCCTGGG CATGGTCGCC
TTCCTGGTGG ACGGCCAGTA CCTGATCGCC GGGGACAGCA TCTTCCTGGA GTCCATCGCC
CGGCCCGACC TCGGCGGTGC CGCCGAGGCG TGGACACCGC TCTTCCACGA GTCCCTCCAG
CGCCTGCTGG CCCTGACCGA GGACACGGTG GTCCTGCCCG GTCACGCCAC CGACGCCGGC
ATCGCCGACG AACGCGGGCG CTTCAGCGCC GAGCTCGGCG CCCTGCACCG CAGCAACCCC
GGTCTCCGCC AGGTCGATGC CGGCCTGGAG TCGTTCCGCA GCTACATCCT CGGCAGCCTG
CCCCACTTCC CCGAGGCGTA TATCGAGATC AAACGGGTGA ACATCGGCCT CGCCCACCCC
GACGAGACCG AAGCCCGGCG CCTGGAGGTG GGGAAGAACG TCTGTGCCCT GAGCGAGGCC
GCGGCCGCCT GA
|
|---|
| Protein sequence | MLDTLKTAWT PAVAWEQLLG GGPLFILDVR NPDEFERWRV EGPHDTPTLN APYFELLDLD
DEDEDVNAAV LRGVRQQLTH QLPNDRTILT VCGEGHTSEH LADGLRELGY PALNLEGGME
AWGDFYYHRV VGNHERYTVY QVVRPARGDL SHVVISDGEA AVVDPNRHVE VYEELVHARG
ARITQVLDTH AHADHISGGP ELARRHRVPY YLHPYDAIHP MDMLPARIDF APLYAEQHVP
VGGITLRALH VPGHTLGMVA FLVDGQYLIA GDSIFLESIA RPDLGGAAEA WTPLFHESLQ
RLLALTEDTV VLPGHATDAG IADERGRFSA ELGALHRSNP GLRQVDAGLE SFRSYILGSL
PHFPEAYIEI KRVNIGLAHP DETEARRLEV GKNVCALSEA AAA
|
|---|
| |