Gene Hhal_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1882 
Symbol 
ID4710704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2062553 
End bp2063440 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID639856355 
Productglutamyl-tRNA synthetase, class Ic 
Protein accessionYP_001003448 
Protein GI121998661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCC CCGGCCCGCC TTTCGCCACC CGCTTCGCCC CGTCGCCGAC GGGGCCGTTG 
CACTTCGGCT CCCTGGTGGC GGCACTGGGG GGCTGGATCG AGGCCCGCCA CCACGGCGGG
GTGTGGCATG TGCGCATCGA CGACCTGGAC CCGCCCCGGG AGGAGCCCGG CGCCGCCGAT
GCCATCCTGC ACACCCTGAC GACCTACGCC CTGGAGTGGG ACGGGCCGGT GGTCTATCAG
AGCCAGCGGG GCACCGCGTA CCAAGCGGCC ATCGAGACCC TGCGTGAGCA GGGCCTGGCC
TATCCCTGCG GGTGCACGCG CAAGGAGATC CAGGCTGCCG CCAGCGCCCA CGGCCCCATC
GGCGTGGTGT ATCCCGGCAC CTGCCGCGAC GGACTGCCCG CCGGGCGCGC GGAGCGAGCG
GTTCGGGTGC GGACCATGGG CGCCCACATC GCCTTCACCG ATCGCGCCGA AGGCCGGGTC
ACCACCGACC TGGAGGCCGA GGTCGGCGAT TTCGTCATCC GCCGGGCCGA TGGCCTCTTC
GCCTACCACC TGGCCTGTGC GGTGGACGAC GCAGCCTACG GCTATACGCA CATCATCCGC
GGCCGCGACC TGCTGGCCTG TACCCCGCCA CAGATCCACC TGCAGCGGCT GCTCGGGCTC
CCCGAGCCGG AGTACCACCA CCTGCCGCTG GCCCGGAACC AGGCCGGACA GAAGCTCTCC
AAGCAGAACC ACGCGCCGCC GCTGACGGAC GATCAGGCGC CTGCGAATCT GGTCGATGCC
CTGGCCCTGC TCGGCTACAC GCCTCCGCCC GCACTCCGCC GGTCCACACC GGCGGAGGTC
CTGGCCTGGG CCCTAGCGGC CCGCGGCGGA TCAGAACCGT CGGCTTAA
 
Protein sequence
MTPPGPPFAT RFAPSPTGPL HFGSLVAALG GWIEARHHGG VWHVRIDDLD PPREEPGAAD 
AILHTLTTYA LEWDGPVVYQ SQRGTAYQAA IETLREQGLA YPCGCTRKEI QAAASAHGPI
GVVYPGTCRD GLPAGRAERA VRVRTMGAHI AFTDRAEGRV TTDLEAEVGD FVIRRADGLF
AYHLACAVDD AAYGYTHIIR GRDLLACTPP QIHLQRLLGL PEPEYHHLPL ARNQAGQKLS
KQNHAPPLTD DQAPANLVDA LALLGYTPPP ALRRSTPAEV LAWALAARGG SEPSA