Gene Hhal_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1881 
Symbol 
ID4710703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2062183 
End bp2062539 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content62% 
IMG OID639856354 
ProductGTP cyclohydrolase I 
Protein accessionYP_001003447 
Protein GI121998660 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGG AACCGTCGAA AACGCTGGAG ACCTTCGAAA ACCCCAACCC GGAACGGGAT 
TACACCATCC GCATGGAGAT CCCGGAGTTC ACCTGCCTGT GCCCGAAGAC CGGCCAGCCC
GACTTCGCCA CACTCAACCT GGAGTACATC CCGGAACGGC ACTGCGTGGA GCTCAAGTCG
CTGAAGCTCT ACATCTGGTC CTACCGCGAC GTGGGCGGGT TCCACGAAGC CCTGACCAAC
CAGATCCTTG GTGACCTGGT CGCCGCCACG CAGCCGCGCT ACATGAAGCT GACGGCGCAT
TTCAATGTCC GCGGCGGGAT CTGGACCACG GTCGAGGCCG AGCACCACGG CCGCTGA
 
Protein sequence
MSTEPSKTLE TFENPNPERD YTIRMEIPEF TCLCPKTGQP DFATLNLEYI PERHCVELKS 
LKLYIWSYRD VGGFHEALTN QILGDLVAAT QPRYMKLTAH FNVRGGIWTT VEAEHHGR