Gene Hhal_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1870 
Symbol 
ID4711191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2044328 
End bp2045452 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID639856342 
Productradical SAM domain-containing protein 
Protein accessionYP_001003436 
Protein GI121998649 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGC ATCAGGCATC TCCCCCTGTG GTAAGAGCGC GCGACCCGGA CGACCCGTCC 
GTCGTGGCCA CGCGCTTCTG GGGCCGGTGT GACGACGGTC GGGTGCAGTG CGATCTGTGC
CCGCGTCACT GCCGGATGAA GGAAGGCCAG CGGGGGCTGT GCTTCGTGCG TATGGCCCGT
GGCGGTGAGG TGGTGCTGAC CACCTACGGC CGTTCCAGCG GCTTCTGTAT CGATCCCATC
GAGAAGAAGC CGCTGAATCA CTTCCTGCCC GGTTCGGCGG TGCTCTCCTT CGGTACGGCC
GGCTGCAATC TGGCCTGTAA GTTCTGCCAG AACTGGGATA TGAGCAAGTC CCGGGAGATG
GACATCCTGG CCGACCGGGC CGAGCCGGAG CAGATCGCTG CCGCAGCGGC GGCGAACGGG
GCGCAGAGCG TGGCCTTCAC CTACAACGAC CCGGTGATCT TCCACGAGTA CGCGGTCGAC
GTGGCGGCGG CGTGTCGCGA GCGCGGCATC CGCACGGTTG CGGTCACCGC CGGGTACATA
TGCCCGCAGC CGCGGGCCGA GTTCTTCGCC GGGATGGATG CCGCCAATGT CGATCTGAAG
GCCTTCACCG AGCGTTTCTA CCACCGGCTC ACCGGTGCCC ACCTGGGGCC GGTGCTGGAT
ACGCTGCGCT ACATTCGCCA CGAGACCGAC TGCTGGCTGG AGCTCACCAC GCTGCTCATC
CCTGGGGAGA ACGATGCCGA TGCCGAGATC GAGGCCATGG CGCAGTGGGT CCTGGAACAC
CTCGGGGCGG AGGTGCCGCT GCACTTTACC GCCTTCCTTC CGGCGTTCCG CATGATGGAT
CGACCGCAGA CGCCACCGCA GACCCTGAAG CGTGCCCGGG CGGTCGCACT GGCGCAGGGG
CTGCGCTACG TCTACACCGG CAACGTCCTC GATCCGGAGG GCGGGACGAC CTACTGCCAC
GCCTGCGGCG AGCGGCTCAT CGAACGGCAT CGTTACGAAC TCGGTGCCTG GCAGCTGGAC
GCGCACGGCG CCTGCCAGCG CTGCGGGGCG AACTGCGCCG GGTTGTTCGC GGCTCGGCCC
GGCGAGTGGT CGGGCCGGCG CCGGCCGGTG CGTATCGGCA GCTAG
 
Protein sequence
MAMHQASPPV VRARDPDDPS VVATRFWGRC DDGRVQCDLC PRHCRMKEGQ RGLCFVRMAR 
GGEVVLTTYG RSSGFCIDPI EKKPLNHFLP GSAVLSFGTA GCNLACKFCQ NWDMSKSREM
DILADRAEPE QIAAAAAANG AQSVAFTYND PVIFHEYAVD VAAACRERGI RTVAVTAGYI
CPQPRAEFFA GMDAANVDLK AFTERFYHRL TGAHLGPVLD TLRYIRHETD CWLELTTLLI
PGENDADAEI EAMAQWVLEH LGAEVPLHFT AFLPAFRMMD RPQTPPQTLK RARAVALAQG
LRYVYTGNVL DPEGGTTYCH ACGERLIERH RYELGAWQLD AHGACQRCGA NCAGLFAARP
GEWSGRRRPV RIGS