Gene Hhal_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1855 
Symbol 
ID4709063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2027169 
End bp2027798 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID639856327 
Productphosphoglycerate mutase 
Protein accessionYP_001003421 
Protein GI121998634 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID[TIGR03162] alpha-ribazole phosphatase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.54332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGACCCC CCATCGAAGG CCAAGAGACC TGGATCGACC TGATCCGCCA CGGCGAACCG 
GAGGGGGGCC GCCGCTACCG GGGCACCCAG GACGACCCGC TCAGTGAGCG CGGTTGGGCG 
CAGATGCGCG CCGCCCCGCT GGAGCCCGGA TCGCTGACCC GGGTGGTCTG CTCACCGCTG 
CGCCGCTGCC GCGAGTTCGC CGAGCATTAC GCCGCCGAGC AGGGCCTGGC GCTGCAGGTC 
GAGGAGGGCT TCCGCGAGAT CGGCTTCGGC GACTGGGAAG GCCTGACCCC GGCCGAGCTC 
TACGAGCAGG ATCCCCAGGG GCAGGCCCGC TTCTGGGCCG ACCCAATGAA CTACACCCCC 
CCCAACGCCG AGCCCATGGC GGACTTCCAG CGCCGGGTCA CCGAGGCCTG GCAGCGGGTG 
CTGGTGGAAC ACCCCGGTGA GCACCTGCTG CTGGTCGGGC ACGGCGGGCT GATCCGTGTG 
GTGCTCTCGC ACTTGCTGGA GCTGCCGCTG CGCGGTTTCA ACCGCCTGTA CGTCCCGTAC 
GCCTCGGTCA GCCGGGTGCG CGTCGAGCCC GGCACCGAGC CGACCCTCTA CTTCCACAAC 
CGCGCAACCT CAGCGGAGGG TGAGCGATGA
 
Protein sequence
MRPPIEGQET WIDLIRHGEP EGGRRYRGTQ DDPLSERGWA QMRAAPLEPG SLTRVVCSPL 
RRCREFAEHY AAEQGLALQV EEGFREIGFG DWEGLTPAEL YEQDPQGQAR FWADPMNYTP 
PNAEPMADFQ RRVTEAWQRV LVEHPGEHLL LVGHGGLIRV VLSHLLELPL RGFNRLYVPY 
ASVSRVRVEP GTEPTLYFHN RATSAEGER