Gene Hhal_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1782 
Symbol 
ID4710598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1956386 
End bp1956991 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content69% 
IMG OID639856252 
Productpyridoxamine-phosphate oxidase 
Protein accessionYP_001003348 
Protein GI121998561 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGC CGGGGATGGA TTCGGACACG ATCTATCAGG AGGCCCTGAG CCGCGTGCAC 
CAGGTACTGG AGCGGGCCCG GGCCACGGAT CTGCCGGAGC CCACCGCGGG CATCCTGGCG 
ACGGTGGGAC GCGACGGGTG GCCGGCAGCG CGGACGGTGC TCCTCAAGCA GCTCGACGAG 
CAGGGTGCCG TTTTCTACAC CAACCGTGCC AGTCGCAAGG GGCAGCAACT GGCCGATAAC 
CCCCGTGCGG CGCTGTGCCT GCACTTCCAG CCGCTCTACG AGCAGGTGGA GATCCGCGGC 
GTGGTGGCCG CGGTGAGCGC CAGCGAGGCG GATCGCTACT GGGCGCAGCG GGAGCGGTTG 
AGCCAGTTGG GGGCTTGGGC CTCTCACCAG TCGGAGCCGC TGGCCAGTCG TCACGAGCTG 
GAGGCCCGCC TGGAGGAGGT CGAGTCGCGT TTCCCCGAGC GTGTACCCCG CCCCCCGCAC 
TGGTCGGGGT ACCGTATAAT CCCGGTCAGC ATTGAGCTCT GGTCGGCCGG GGATGGCCGC 
CTGCATCAGC GCGAGCGATA CGAGCACCGG ACGGACGGCT GGAGCCATTT CCTACTCAAC 
CCGTGA
 
Protein sequence
MTEPGMDSDT IYQEALSRVH QVLERARATD LPEPTAGILA TVGRDGWPAA RTVLLKQLDE 
QGAVFYTNRA SRKGQQLADN PRAALCLHFQ PLYEQVEIRG VVAAVSASEA DRYWAQRERL 
SQLGAWASHQ SEPLASRHEL EARLEEVESR FPERVPRPPH WSGYRIIPVS IELWSAGDGR 
LHQRERYEHR TDGWSHFLLN P