| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1707 |
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| Symbol | |
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| ID | 4710173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1863181 |
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| End bp | 1865607 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856174 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001003273 |
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| Protein GI | 121998486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | [TIGR03158] CRISPR-associated helicase, Cyano-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0661739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGGCA AGCACACAGA GGGTGACCAG GATCCGGTCC GGGCGGTGGC CGAGCGGCTG
CAGCGTCGCT ACCACGAGCG GATCGCCGGT GAGCTGGTGT TGCCCGCCCG GCCGGCACGC
ACCGCATCGT TGCCCGAGGA CCTTGCCCCG CCCGTGGCCG AGGCGTTGCG ACAGCGGGGC
ATCGAGCAGC TCTATAGCCA CCAGCGGCAG GCGTGGGACC GGATCCGCGC CGGCCAGCAT
ACGGTGGTGG TCACCCCGAC CGCATCCGGG AAAACGCTCT GCTACAACCT GCCGGTCCTG
CACGAGGCGC TAACCGGCAG TGGCAAGGCC CTCTATCTGT TTCCGACCAA GGCCCTGGCC
CAGGATCAGG TCGCCGAGCT GCACGAGCTC AACCAGGCCG GCGGGTTGGG CGTACGGGCC
TATACCTTCG ATGGCGACAC GCCCGGGGAT GCCCGCAAGG CGGTGCGGAC CCGCGGCGAC
GTCGTCGTCT CCAATCCGGA CATGCTCCAC CAGGGGGTGC TGCCCCACCA CACCAAGTGG
GCACAGTTGT TTGAGCAGCT GCGCTACGTG GTGGTCGACG AGATGCACAC CTACCGGGGT
GTGTTCGGCT CCCACGTCGC CAATCTGTTC CGACGCCTGC GCCGGGTCTG CCGCTTCTAC
GGCGCTGACC CGGTGTTCAT CTTCACCTCG GCGACCATCG CCAACCCCGG GGAGCTGGCC
GGACGGCTGA TCGGCGAGGC CGGGATCGAG GCGATCACCG AAAGCGGGGC CCCGGCGGGT
GAGAAGCGCC TGCTGCTGTG GAACCCGCCG GTGATCGACC CCGACCTGGG CATTCGGGCT
TCGGCGCGCT CGCAGACGAC ACGGATCGCC CGGCTGGCTG TGCGCAGCGG TCTGAAGGCC
ATCCTCTTCG CGCGCAGCCG CCTGATGGTC GAAGTGCTGA CCAAGTACCT CAAGGATGTC
TTCGACCGCG ATCCGCGCCG GCCTCCGCGG GTGGCCGCCT ACCGCGGGGG GTACCTGCCC
GCCGAGCGGC GGGAGACCGA GCGGGCCCTG CGGGGTGGCG GTGTCGACTG CGTGGTGGCC
ACCTCGGCGC TCGAACTCGG GGTGGATATC GGCAGTCTCG ATGTGGCCGT GCTCAATGGC
TATCCCGGTA CCATCGCCGG GACCTGGCAG CGGCTCGGGC GGGCCGGGCG GCGCAATCGC
ACAGCCCTCG GGGTAGTGGT GGCCACCAGT GAGCCGCTGG ATCAGTACAT GGTGCGCAAT
CCGGATTTCT TTCTCGGCGC TTCGCCTGAG CACGCCCGGA TCGACCCCGA TCAGCTCCTG
ATCCTCCTCG ATCACGTGCG GTGTGCGGCC TTCGAGCTGC CCTTTCGGCA AGGGGAGCAG
TTCGGCGGCG AGGATCTCGA AGAGCTGCTC GACTACCTGG TCGAGCAGGG GCTGCTGTAC
CGGGAGGGGG AGCGGTGGCA CTGGGTTGCA GACAGCTACC CGGCCAATGA CGTCAGCCTG
CGTTCGGTCA GTGACGGCAA CTTCGTGGTG ATCGATACCA CCGACGGCGC CCAGCGGGTG
ATTGCCGAGG TGGACTACAC CGCCGCCCCG ATGACCCTCT ACGAGGGGGC GATCTACATG
ATCCAGGCGC GCCCCTATCA GGTGGAGCGC CTCGACTGGG AAGGCCGTAA GGCGTTCGTC
CGCGAGACGC GGGCCGATTA CTACACCGAC GCCATCGATT ACACCCGGCT GAAGATCCTG
GAACGCTTCG AGGGGCAGCG CGGCGGCGAA GCGGAAGCCG CCCACGGCGA GGTCCACTTG
GTCCGGCGCA TCGCCGGCTA CAAGAAGATT CGCTACTACA CGCACGAGAA CATCGGCTTC
GGGGACATCG AGCTCCCCGA CCAGGAGATG CACACCACGG CGGCCTGGTG GACCATCGAG
CCCGGCGCCC TGGAGGCGGC CTTTACCGCT CGTCACCAGG CCCTCGACGG GTTCCTCGGT
GCGGCCTATG CCCTCCACCA CGTGGCCGCC CTGCGCCTGA TGTCGGAACC GGGCGATCTG
GGCCGGGCGG TCGGCGACGG CGATGCCGAG TGGTTCGCTG TCACCGGCCC TCGCGGTCGC
GGCCAGATCC GTGACGCCAG CGGCGTGGAG CGCGGGGTGG AGCATGCGGA GCGTTTCCAG
CCGGCGGTTT TCCTCTACGA CAACTACCCG GGCGGTGTCG GGCTCTCGGC ACCGCTTTTC
GATCAGCGCG CCGCGGTGGT TGCCGATGCC CACGAGCTGG TTCAGGGGTG CGAGTGTGGT
TTCGGTTGTC CGGCGTGTGT CGGGCCGGTC CTGGCCTCGG AGGAGACCCG GGGGCAGTCG
CCCAAGGCGG CGGCGCTGAC CGTGCTCGAG CTTTTGATGA CCGGCCATCG GGCTGTCCAC
CTGGGCGCGG GCGAGGCCCT GCAGTAG
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| Protein sequence | MVGKHTEGDQ DPVRAVAERL QRRYHERIAG ELVLPARPAR TASLPEDLAP PVAEALRQRG
IEQLYSHQRQ AWDRIRAGQH TVVVTPTASG KTLCYNLPVL HEALTGSGKA LYLFPTKALA
QDQVAELHEL NQAGGLGVRA YTFDGDTPGD ARKAVRTRGD VVVSNPDMLH QGVLPHHTKW
AQLFEQLRYV VVDEMHTYRG VFGSHVANLF RRLRRVCRFY GADPVFIFTS ATIANPGELA
GRLIGEAGIE AITESGAPAG EKRLLLWNPP VIDPDLGIRA SARSQTTRIA RLAVRSGLKA
ILFARSRLMV EVLTKYLKDV FDRDPRRPPR VAAYRGGYLP AERRETERAL RGGGVDCVVA
TSALELGVDI GSLDVAVLNG YPGTIAGTWQ RLGRAGRRNR TALGVVVATS EPLDQYMVRN
PDFFLGASPE HARIDPDQLL ILLDHVRCAA FELPFRQGEQ FGGEDLEELL DYLVEQGLLY
REGERWHWVA DSYPANDVSL RSVSDGNFVV IDTTDGAQRV IAEVDYTAAP MTLYEGAIYM
IQARPYQVER LDWEGRKAFV RETRADYYTD AIDYTRLKIL ERFEGQRGGE AEAAHGEVHL
VRRIAGYKKI RYYTHENIGF GDIELPDQEM HTTAAWWTIE PGALEAAFTA RHQALDGFLG
AAYALHHVAA LRLMSEPGDL GRAVGDGDAE WFAVTGPRGR GQIRDASGVE RGVEHAERFQ
PAVFLYDNYP GGVGLSAPLF DQRAAVVADA HELVQGCECG FGCPACVGPV LASEETRGQS
PKAAALTVLE LLMTGHRAVH LGAGEALQ
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