Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1683 |
Symbol | |
ID | 4709221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1837493 |
End bp | 1838869 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639856150 |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_001003249 |
Protein GI | 121998462 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.763853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGCA GTAGAGACGA TACCGCCGTC TACACCCCCT CGCAGCTCAA TCAGGAGGTG CGGGGCATGC TCGAGACGGT GCTCCCGTCC GTCTGGGTTG AGGGCGAGAT CTCGAACCTC GCCCGCCCCT CGTCAGGGCA CATGTATTTC ACCCTCAAGG ACCCCGGCGC CCAGGTCCGC TGCGCCCTGT TCCGCGGCCG GGCCTCGGCC CTGCGCCACC GCCCCGCCGA CGGCGATCAG GTCCGCATCC GCGCCAAGGC CAGCCTCTAC CCGGCCCGCG GCGAGTTTCA GCTCATCGTC GAACACCTGG AACCCTCCGG AGAAGGTGCC CTGCAGCGCG CCTTCGAGGC GCTCAAGCAG CGCCTGCAGG CCGAGGGCCT GTTCGATGCT GCGAGCAAGC GCCCGGTGCC GAAGATGCCC CGCCGGCTCG GGGTGATCAC CTCGCCGACG GGGGCCGCTA TCCGCGATGT CCTGCAGGTC TTGGAGCGGC GCTTCGCGGC GCTGCCGGTG CTGATCTACC CGGTACCGGT CCAGGGCGAA GCCGCCGCCC CGGCGATCGT CCGAGCCCTG GAACTCGCCG GGCATCGGGC CGAGGTCGAC GCCTTGCTGC TCACCCGCGG TGGCGGTTCG CTGGAGGACC TCTGGCCCTT CAATGAGGAA GCGGTCGCGC GGGCCATCCG CGCCTGCCCG ATCCCGGTCG TCAGCGCCGT CGGCCATGAG GTGGACCTCA CCATCGCCGA TCTGGCTGCG GATCTGCGGG CGCCCACGCC CTCTGCGGCG GCCGAGACCC TGTCGCCCGA CGGCCAGGCC TGGCAGGAGC AGCTCGAGCG CCTCGGCCAC CGCCTGGAGG TGGCCGCCGG CAGGCGCCTG GGCCGGGCGG GTGACCAGCT ATCCGGCCTG CAGCGCCGGC TGGCCGCCCA GCATCCCGGG CGGCGCCTGC GTGATCGCGC ACAGCGACTT GACGAGCTCG AGGGGCGCTT GCACCGGCTC GGCCACCAGG CCGTCGAATC CCGCCGTAGA CGCCTTCACA CGGCCGAACA GCGCCTGCAG GTCCAAGACC CTCGCCGACG CACGACCAAC GAGCGGCAGC GTGTGGCGGA GCTGGCGCAG CGCCTGCACC ACACCGTCCG CGGCCGGCTG GAGACATCGC AACAACGACT GGGCAATGCC TCGCGTGCCC TGCACGCCGT GAGCCCGCTG GCCACACTGG AACGCGGCTA CGCCGTGGTA CAGCGGGAGG AGGACAGCGC GATCCTGCGC CGGGCCGACG CCGTCCGGGT GGGGGAGCGC ATCCGTGCCC GCCTGGCCCA CGGCGCGCTA GACTGTCGGG TTGAGGCACT GCGTAACGCG GAGGAATCGC TGCCCGATGC CGACTGA
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Protein sequence | MERSRDDTAV YTPSQLNQEV RGMLETVLPS VWVEGEISNL ARPSSGHMYF TLKDPGAQVR CALFRGRASA LRHRPADGDQ VRIRAKASLY PARGEFQLIV EHLEPSGEGA LQRAFEALKQ RLQAEGLFDA ASKRPVPKMP RRLGVITSPT GAAIRDVLQV LERRFAALPV LIYPVPVQGE AAAPAIVRAL ELAGHRAEVD ALLLTRGGGS LEDLWPFNEE AVARAIRACP IPVVSAVGHE VDLTIADLAA DLRAPTPSAA AETLSPDGQA WQEQLERLGH RLEVAAGRRL GRAGDQLSGL QRRLAAQHPG RRLRDRAQRL DELEGRLHRL GHQAVESRRR RLHTAEQRLQ VQDPRRRTTN ERQRVAELAQ RLHHTVRGRL ETSQQRLGNA SRALHAVSPL ATLERGYAVV QREEDSAILR RADAVRVGER IRARLAHGAL DCRVEALRNA EESLPDAD
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