| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1680 |
|---|
| Symbol | |
|---|
| ID | 4709910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1833812 |
|---|
| End bp | 1834240 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639856147 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_001003246 |
|---|
| Protein GI | 121998459 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0174432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAG CGCTGGAGTT GGCGCGATAT GCCGCGGACC AGGGCGAGGT GCCCGTGGGG
GCGGTGGTGG TCCGCGACGG GGTACTGCTC GGCGAAGGGA GGAACCAGCC GATCGTCAGC
CGCGATCCAA CCGCCCATGC CGAGATCAAC GCGCTGCGCG CGGCCGGTCA GGCCGCGGGG
GCGTATCGCC TCCCCGGGGC AACGCTCTAC GTCACCCTCG AGCCGTGCTT CATGTGTGCC
GGGGCATTGA TCCACGCCCG CATCGAGCGC CTGGTCTACG GCGCCGCGGA TCCCAAAACC
GGTGCCTGTG GGGGGCAGTT CGACCTGCTC GGTCTGCCCG GGCATAACCA TCGGGTGGAG
GTGACCGCTG GCGTCTCCGG CGAGGCGGCC GCCGGGCTGC TGCGTGAATT CTTTCGCGCC
CGGCGTTAA
|
|---|
| Protein sequence | MARALELARY AADQGEVPVG AVVVRDGVLL GEGRNQPIVS RDPTAHAEIN ALRAAGQAAG
AYRLPGATLY VTLEPCFMCA GALIHARIER LVYGAADPKT GACGGQFDLL GLPGHNHRVE
VTAGVSGEAA AGLLREFFRA RR
|
|---|
| |