| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1653 |
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| Symbol | alaS |
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| ID | 4709710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1805500 |
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| End bp | 1808091 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639856120 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001003219 |
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| Protein GI | 121998432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.149949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGG CGCAGTTGCG CGCCGCCTTC CTGGACTTCT TCAGGGAGCG GGGGCACGAG
GTCGTGCCGA GTTCGCCGTT GGTGCCGGCC AACGACCCGA CGCTGCTCTT TACCAACGCC
GGGATGGTCC CGTTCAAAGA GGTCTTCCTG GGGCGGGAGC AGCGCGGCTA CCAGCGGGCC
ACCAGTAGCC AGCGCTGCGT GCGCGCCGGC GGTAAGCACA ACGACCTGGA GAACGTCGGC
TACACGGCCC GGCACCACAC CTTCTTCGAG ATGCTGGGCA ACTTCTCTTT CGGCGACTAC
TTCAAGCGGG ATGCCATCCG CTACGCCTGG TCGTTCTTGA CCGAGGTGGT GGAGCTTCCG
CCCGAACGGC TCTGGGTGAC GGTCTACGAG GATGACGACG AGGCCGCGCA GATCTGGCTG
GAAGAGATTG GCGTGGATCC GGCGCGGTTC CGCCGGATCG GTGCCCACGA CAATTTCTGG
TCCATGGGGG ATACCGGGCC GTGCGGGCCG TGCTCGGAGG TCTTCTACGA CCACGGTCCC
GAGGTGCCGG GCGGGCCGCC GGGTTCCGAT GAAGAGGATG GTGACCGGTA CATCGAGGTC
TGGAACCTGG TGTTCATGCA GTACGACCGC GATGCCGAGG GCAACCTGAA CCCGCTGCCG
AGTCCTTCCA TCGACACCGG GATGGGCCTG GAGCGCCTGG CCGCGGTCCT GCAGGGCGTC
CACGACAATT TCGAGACGGA CCTGTTCACC CCGCTGATCG ATGCCGCCGG CGAGATCGCC
GGGGTCAGCG ATCGGCGCAA GCCCTCGCTC AAGGTAGTTG CCGACCATAT CCGCGCTTGT
TCGTTCCTGA TCGTTGATGG GGTGTTGCCC TCGACGGAGG GGCGCGGGTA CGTGTTGCGC
CGGATCATCC GGCGGGCGGT ACGCCACGGA TATCAGTTGG GCATCGATGA GCCGTTCTTC
TACCGCCTGG TCGATCCGCT CGATGCGGTC ATGGGCGAGG CATTCCCGGA GCTGCGTGAC
CGCCGTGAAT TCGTCGAAAA GATCCTCTTC CAGGAGGAGA AGCGGTTCCG CGAGACGCTG
GAAGACGGAC TCGCGCTGCT TGACGAGTAC CTCGGCGGGA ACGACAGCGG GGTGATCGAT
GGCGAGGTGG TGTTCAAGCT CTACGATACC CATGGCTTCC CGGTGGACCT GACCGCGGAT
ATCGCCCGCG AGCGCAACCT TGAGGTGGAC TATCAGGGCT TCGAGGCGCG CATGGCCGAG
CAACGGGAGC GCGCGCGCGC GGCTAGCCGG TTTGGCGGGG CGCGTGAGGA AGTGGTTGAC
GCGGGCGAGA GCCGCTTCAC CGGCTACGAG ACCCTCGAGG ATGTCGGCTC GGTGATCGGG
CTGTATCAGG ACGGCCGCTC GGTACAGCGG TTGCAGCCCG GCGAAGAGGG GATGGTGGTC
CTCGACCGGA CTCCGTTCTA CGCCGAGTCG GGTGGTCAGG TGGGCGATCG CGGCGAAATC
CTCGCCAACG GTCTACGCTT CCGGGTAGCG GACACCGTGA AGCAGGGCGA GGCCCATGGT
CACCTGGGGC GTCTGGAATC GGGCGAGCTG GGTGTCGGCG ATCAGGTTAC CGCGCGGGTG
GATCGTGGCA CCCGCGAGGC AACGGTCCGC AACCACTCCG CCACGCACCT GCTGCACGCC
GCGCTGCGCG AGATCCTGGG GGATCATGTT CAGCAGAAGG GATCCCTGGT GGCGCCGGAT
CGCCTGCGTT TCGACTTCTC CCACTACGAG GCGCCGTCGC GGGAAGACCT GGAACGGATC
GAGGCGCGCG TGAATCAGGA GATCCTCACC AATCACCCCG TCGAGGCGGC GCACATGGCC
TACGAAGAAG CAGTCCAGGT CGGAGCTATG GCGTTGTTCG GCGAGAAGTA CGGGGATACG
GTGCGGGTGA TCTCCCTGGG GGACTATTCC CAGGAGCTCT GTGGTGGCAC CCACGCCGCC
CGGACTGGGG ACATCGGGTT GTTCAAAATC ATCGACGAGA CGGGTGTGGC CGGCGGCGTG
CGGCGCATCG AAGCGATCAC TGGTGAGCGG GCCATCGGCT GGGTCCAAGA GGCGGAAGGG
CGGTTGAATC GGTTGGCAGA TCTCCTGCGT GTCGGGCCGG ACAACCTGGT GATGAAGGTC
GAGCAGCTCA GCGAGCGCAC CCGCGAGCAG GAGAAAGAGA TTGAGCGCCT CAAGCAGAAG
CTCGCTACGC AGGCCGGGCG TTCGCTGTTG GATGATGCCG GTGAGGTTGC CGGTGTCCGC
TTCTTGGCCA CCTGCGTTGA AGGGGGTGGC AAGGGGTTGC GGGATACCCT GGATCAGCTC
AAGAACCAAC TCGGCAGTGG CGTGATCGTG CTGGCGGCGG TTCAGGGCGA AAAGGTCCAG
CTGGTAGCGG GTGTAACCAA GGATCTGACC GATCGATTGG CCGCCGGCGA TCTGGTCAAT
CATGTCGCCG CCCAGGTTGG GGGGCGCGGC GGAGGGCGGG CGGACTTCGC CCAGGCAGGG
GGTAAAGACC CAAGCCACGT CAATGATGCG TTGGCTTCAG TCGAAGCTTG GATTAAGGAT
AACTTGACTT AA
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| Protein sequence | MTSAQLRAAF LDFFRERGHE VVPSSPLVPA NDPTLLFTNA GMVPFKEVFL GREQRGYQRA
TSSQRCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIRYAW SFLTEVVELP
PERLWVTVYE DDDEAAQIWL EEIGVDPARF RRIGAHDNFW SMGDTGPCGP CSEVFYDHGP
EVPGGPPGSD EEDGDRYIEV WNLVFMQYDR DAEGNLNPLP SPSIDTGMGL ERLAAVLQGV
HDNFETDLFT PLIDAAGEIA GVSDRRKPSL KVVADHIRAC SFLIVDGVLP STEGRGYVLR
RIIRRAVRHG YQLGIDEPFF YRLVDPLDAV MGEAFPELRD RREFVEKILF QEEKRFRETL
EDGLALLDEY LGGNDSGVID GEVVFKLYDT HGFPVDLTAD IARERNLEVD YQGFEARMAE
QRERARAASR FGGAREEVVD AGESRFTGYE TLEDVGSVIG LYQDGRSVQR LQPGEEGMVV
LDRTPFYAES GGQVGDRGEI LANGLRFRVA DTVKQGEAHG HLGRLESGEL GVGDQVTARV
DRGTREATVR NHSATHLLHA ALREILGDHV QQKGSLVAPD RLRFDFSHYE APSREDLERI
EARVNQEILT NHPVEAAHMA YEEAVQVGAM ALFGEKYGDT VRVISLGDYS QELCGGTHAA
RTGDIGLFKI IDETGVAGGV RRIEAITGER AIGWVQEAEG RLNRLADLLR VGPDNLVMKV
EQLSERTREQ EKEIERLKQK LATQAGRSLL DDAGEVAGVR FLATCVEGGG KGLRDTLDQL
KNQLGSGVIV LAAVQGEKVQ LVAGVTKDLT DRLAAGDLVN HVAAQVGGRG GGRADFAQAG
GKDPSHVNDA LASVEAWIKD NLT
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