| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1618 |
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| Symbol | |
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| ID | 4709616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1764558 |
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| End bp | 1765652 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639856083 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001003184 |
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| Protein GI | 121998397 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTAC CTTCGCCTGA TCCAAGCCTG GCACCGGAGC CATATCTGCT CCACACGGAT
CGCCGAGCTT GTCGGGCCCT GCTTAGCACC GGGTCGCGGA CTTTCATGGC CGCGTCCTGG
CTGCTCCCGC GGGAGCGCCG TGATGCCGCC ACTGCCCTCT ACGCCTTCTG CCGCGAGGCA
GACGATGCCG TGGATGAGGG GCCAGGCGAT GCGGCGGCAC TGGCGGCGCT GCATGAGCGC
CTGGATGCGG TCTACGCCGG TCGGCCGCAG GCCCATCCTG CGGATCGTGC CTTCGCCTGC
GTGGCCCACT ACTACAATGT CCCGCAGACC CTGCCGGGGG CGTTGATCGA GGGGTTTCGC
TGGGACGCCG AGGGGCGCCG TTACGAGACC ATCGAAGAAC TCTACGAGTA CGCCGTGCGT
GTCGCGGGCA CAGTCGGGGT GATGATGTCG CTGCTCATGG ATGTGCGTAG CCCCTCAGCA
CTGGCCCGGG CGTGCGACCT CGGGGTCGGT ATGCAGTTGA CCAACATCGC CCGCGATGTC
GGCGAGGATG CACGGCGCGG CCGGCTTTAT CTGCCGCGGC AGTGGATGTA CGAGGCCGGT
GTCGACCCGG ACGCATTCCT AGCCCGGCCG CAATTCTCGC CGGAGCTCGG CAGGGTCATT
CAGCGCCTTC TGTGTGACGC CGATCGCCAC TACGAACGGG CCATGCCGGG CTTCCACGCG
CTGCCGCGGC GGGTACGCCC GGGGCTGTGT GCCGCCCGGC TCCTCTACGC TGAGATCGGC
CGCGAACTCG AGCGCCGGGA CTGCGACTCG GTCAATCAGC GGGCCGTAGT CGGCGCGCAG
CGCAAGCTGC GCGTCCTCTC CCAGGTGGCC TCGACCCTGG CCGCCGCTCC GCGGGACGAC
TCGGCGCCGG CCTTACCACA GGGGCAGTAC CTGATCGATG CCGTCCGGCA GGCACCCGAG
GCTGTGGGTC CGCCGGGGCG CCTCGAGGGG CAGGTCGCTT GGGTGCTGGG CCTGTTCGAG
CGCCTCGAGC GGATGGATGC GGAGCGCCTG GAGCGTATGG ATGCCGCCCG ATCCGGGCGC
CAGGTCTCCG GCTGA
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| Protein sequence | MLVPSPDPSL APEPYLLHTD RRACRALLST GSRTFMAASW LLPRERRDAA TALYAFCREA
DDAVDEGPGD AAALAALHER LDAVYAGRPQ AHPADRAFAC VAHYYNVPQT LPGALIEGFR
WDAEGRRYET IEELYEYAVR VAGTVGVMMS LLMDVRSPSA LARACDLGVG MQLTNIARDV
GEDARRGRLY LPRQWMYEAG VDPDAFLARP QFSPELGRVI QRLLCDADRH YERAMPGFHA
LPRRVRPGLC AARLLYAEIG RELERRDCDS VNQRAVVGAQ RKLRVLSQVA STLAAAPRDD
SAPALPQGQY LIDAVRQAPE AVGPPGRLEG QVAWVLGLFE RLERMDAERL ERMDAARSGR
QVSG
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