Gene Hhal_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1616 
Symbol 
ID4709604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1758082 
End bp1759548 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content63% 
IMG OID639856081 
Productglutamate synthases, NADH/NADPH, small subunit 
Protein accessionYP_001003182 
Protein GI121998395 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01317] glutamate synthases, NADH/NADPH, small subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAC AAACTGGATT CTTGGAACAC GAGCGCCAAG AGTACGGCTA TCAGCCGGCC 
TGTAAGCGCG TCTTCCACTA CGGGGAGTTC CTGATCCCGC TCAGCCGGGA GCAAGTCGGC
CAACAGGGGG CTCGCTGTAT GGACTGCGGC ATCCCCTTCT GCCACAGCGG CTGTCCGGTG
GACAACCTGA TCCCGAACTG GAACGACATG GTCTACCGCG GTGAATGGGA GCGGGCCGTC
GAAGAGTTGC ACGCCACCAA CAACTTCCCT GAATTCACCG GCAGGGTCTG CCCGGCACCC
TGTGAGGCCT CCTGTACCCT GAACCTCGAT GACAGTCCTG TATCCATCAA GACCATCGAA
TGCAGCATCG TCGATCGGGC GTGGGAAGCG GGGCTGATCC GTCCCCGGGT GGCCCGCCGC
CGGACGGGTA AGCGGATTGC CGTCGTTGGT TCCGGGCCGG CGGGCCTGGC CTGCGCCCAA
CAACTCGCGC GGGTTGGCCA TAACGTTGAT GTCTACGAGA AAGCCGACGC AATCGGCGGG
CTCCTGCGAT ACGGCATCCC CGATTTCAAG CTTGAGAAGA GGCACATCGA CCGGCGTATC
GCACAGATGC GCACCGAAGG GGTGCAGTTC CACACGTTGA CCCATGTCGG GGTGGACATA
CCGATCGCCC AACTGCGTGA TGAGTTTGAT TCGGTGGTCC TCGCCGGTGG CAGTGAGCAG
CCTCGTGACC TGCCTGTGCC CGGTCGCGAA CTCAACGGCG TCCACTTCGC CATGGAATTT
TTGACCGCCA ACAGCAAGCG GGTCCAGGGC GTGTATGTGC CCGACGACGC GTTCATTGAC
GCCCAGGGCA AGCACGTGGT GGTCATCGGT GGCGGCGATA CGGGCTCCGA CTGTGTGGGG
ACCTCGTGTC GTCATGGGGC ACGCTCTGTG ACCCAGGTGG AAATCCTCAA TAAGCCGCCG
GAAAAAGAGG ATAAAGAGCT GACCTGGCCC TACTGGCCGG AGAAACTCAA CACATCGACC
TCCCACCAAG AGGGGTGCGA GCGGATGTGG AACTTCCTGA CCAAGGAGTT CGTCGGCGAT
GGCAGCGGCC ATGTCCGCGC GATCCGTTAC GCCAAGGTTG AGTGGCACAA GGACCAGCAG
GGCCGCTGGC AGATGAGCGA GATCCCCGGT AGCGAGGCCG AGATGCCGGC CGATCGGGTC
TTTCTGGCTA TGGGGTTTCT CCACCCGGTC CGTGCGGGGA TGATCGCTGA ACTGGAGGAG
AAGGGGGGGC TGGAACTCGA TGACCGCGGC AATGTACGCG GCGATACTGA AGGAGCGGAT
GCCTACAAGA CCAGTACGGA TGGCGTCTTC GTCGCCGGAG ACATGCGTCG GGGCCAGTCA
CTCGTGGTCT GGGCAATCCG CGAAGGCCGG CAGTGCGCTC ATGCGGTCGA CAAGTGGCTG
CAGGGCACGA GCGATCTGCC CCGCTGA
 
Protein sequence
MGKQTGFLEH ERQEYGYQPA CKRVFHYGEF LIPLSREQVG QQGARCMDCG IPFCHSGCPV 
DNLIPNWNDM VYRGEWERAV EELHATNNFP EFTGRVCPAP CEASCTLNLD DSPVSIKTIE
CSIVDRAWEA GLIRPRVARR RTGKRIAVVG SGPAGLACAQ QLARVGHNVD VYEKADAIGG
LLRYGIPDFK LEKRHIDRRI AQMRTEGVQF HTLTHVGVDI PIAQLRDEFD SVVLAGGSEQ
PRDLPVPGRE LNGVHFAMEF LTANSKRVQG VYVPDDAFID AQGKHVVVIG GGDTGSDCVG
TSCRHGARSV TQVEILNKPP EKEDKELTWP YWPEKLNTST SHQEGCERMW NFLTKEFVGD
GSGHVRAIRY AKVEWHKDQQ GRWQMSEIPG SEAEMPADRV FLAMGFLHPV RAGMIAELEE
KGGLELDDRG NVRGDTEGAD AYKTSTDGVF VAGDMRRGQS LVVWAIREGR QCAHAVDKWL
QGTSDLPR