Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1616 |
Symbol | |
ID | 4709604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1758082 |
End bp | 1759548 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639856081 |
Product | glutamate synthases, NADH/NADPH, small subunit |
Protein accession | YP_001003182 |
Protein GI | 121998395 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAAC AAACTGGATT CTTGGAACAC GAGCGCCAAG AGTACGGCTA TCAGCCGGCC TGTAAGCGCG TCTTCCACTA CGGGGAGTTC CTGATCCCGC TCAGCCGGGA GCAAGTCGGC CAACAGGGGG CTCGCTGTAT GGACTGCGGC ATCCCCTTCT GCCACAGCGG CTGTCCGGTG GACAACCTGA TCCCGAACTG GAACGACATG GTCTACCGCG GTGAATGGGA GCGGGCCGTC GAAGAGTTGC ACGCCACCAA CAACTTCCCT GAATTCACCG GCAGGGTCTG CCCGGCACCC TGTGAGGCCT CCTGTACCCT GAACCTCGAT GACAGTCCTG TATCCATCAA GACCATCGAA TGCAGCATCG TCGATCGGGC GTGGGAAGCG GGGCTGATCC GTCCCCGGGT GGCCCGCCGC CGGACGGGTA AGCGGATTGC CGTCGTTGGT TCCGGGCCGG CGGGCCTGGC CTGCGCCCAA CAACTCGCGC GGGTTGGCCA TAACGTTGAT GTCTACGAGA AAGCCGACGC AATCGGCGGG CTCCTGCGAT ACGGCATCCC CGATTTCAAG CTTGAGAAGA GGCACATCGA CCGGCGTATC GCACAGATGC GCACCGAAGG GGTGCAGTTC CACACGTTGA CCCATGTCGG GGTGGACATA CCGATCGCCC AACTGCGTGA TGAGTTTGAT TCGGTGGTCC TCGCCGGTGG CAGTGAGCAG CCTCGTGACC TGCCTGTGCC CGGTCGCGAA CTCAACGGCG TCCACTTCGC CATGGAATTT TTGACCGCCA ACAGCAAGCG GGTCCAGGGC GTGTATGTGC CCGACGACGC GTTCATTGAC GCCCAGGGCA AGCACGTGGT GGTCATCGGT GGCGGCGATA CGGGCTCCGA CTGTGTGGGG ACCTCGTGTC GTCATGGGGC ACGCTCTGTG ACCCAGGTGG AAATCCTCAA TAAGCCGCCG GAAAAAGAGG ATAAAGAGCT GACCTGGCCC TACTGGCCGG AGAAACTCAA CACATCGACC TCCCACCAAG AGGGGTGCGA GCGGATGTGG AACTTCCTGA CCAAGGAGTT CGTCGGCGAT GGCAGCGGCC ATGTCCGCGC GATCCGTTAC GCCAAGGTTG AGTGGCACAA GGACCAGCAG GGCCGCTGGC AGATGAGCGA GATCCCCGGT AGCGAGGCCG AGATGCCGGC CGATCGGGTC TTTCTGGCTA TGGGGTTTCT CCACCCGGTC CGTGCGGGGA TGATCGCTGA ACTGGAGGAG AAGGGGGGGC TGGAACTCGA TGACCGCGGC AATGTACGCG GCGATACTGA AGGAGCGGAT GCCTACAAGA CCAGTACGGA TGGCGTCTTC GTCGCCGGAG ACATGCGTCG GGGCCAGTCA CTCGTGGTCT GGGCAATCCG CGAAGGCCGG CAGTGCGCTC ATGCGGTCGA CAAGTGGCTG CAGGGCACGA GCGATCTGCC CCGCTGA
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Protein sequence | MGKQTGFLEH ERQEYGYQPA CKRVFHYGEF LIPLSREQVG QQGARCMDCG IPFCHSGCPV DNLIPNWNDM VYRGEWERAV EELHATNNFP EFTGRVCPAP CEASCTLNLD DSPVSIKTIE CSIVDRAWEA GLIRPRVARR RTGKRIAVVG SGPAGLACAQ QLARVGHNVD VYEKADAIGG LLRYGIPDFK LEKRHIDRRI AQMRTEGVQF HTLTHVGVDI PIAQLRDEFD SVVLAGGSEQ PRDLPVPGRE LNGVHFAMEF LTANSKRVQG VYVPDDAFID AQGKHVVVIG GGDTGSDCVG TSCRHGARSV TQVEILNKPP EKEDKELTWP YWPEKLNTST SHQEGCERMW NFLTKEFVGD GSGHVRAIRY AKVEWHKDQQ GRWQMSEIPG SEAEMPADRV FLAMGFLHPV RAGMIAELEE KGGLELDDRG NVRGDTEGAD AYKTSTDGVF VAGDMRRGQS LVVWAIREGR QCAHAVDKWL QGTSDLPR
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