Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1604 |
Symbol | |
ID | 4709314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1745568 |
End bp | 1746539 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639856069 |
Product | photosynthetic reaction center subunit M |
Protein accession | YP_001003170 |
Protein GI | 121998383 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.16429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGT ATCAGAATAT CTTTACCCGT GTTCAGGTCC GGGGCCCGAC GGATCCGGGC GTAGAGCTCC CGGCCGCCGA CTGGCCGCGG ACCAAGGGGT CGACGCACTC CTGGTTGCTC GGGAAGATCG GCGACGCACA GGTCGGCCCG ATCTACCTCG GCACCACCGG TGTGATGTCG ATCCTCTTCG GTCTCCTGTC CATCGTCATC ATTGGCATGA ACATGCTGGC GTCCGTGGAC TGGAGCCCGA TTGAGTGGAT TCGTCAGTTC TTCTGGGTGG CGCTGGAGCC GCCGCCGCCG GAGTACGGCC TTAGCCTCCC GCCGCTTAAC GACGGTGGCT GGTGGCTGAT CGCCGGCTTC ACGCTGACCC TGTCGATCCT GCTGTGGTGG GTGCGGACCT ATAACCGGGC GCGTGCGCTC GGGCTGGGGA CGCACGTGGC TTGGGCCTTC GCTGCTGCGA TCTTCCTGTT CCTCGCCATC GGCTTCATCT GGCCGGTGCT GATGGGCAGC TGGGCGAAGA GCGTGCCGTT CGGCATCTTC CCGCACCTCG ATTGGACCAC GGCCTTCTCG CTGCGGTACG GGAACCTCTA CTACAACCCG TTCCACATGC TGTCGATCGT GTTCCTGTTC GGCTCGGCTC TGCTGTTCGC GATGCACGGC GCCACCATTC TGGCGGCGGG TCGCTACAAC GCGGAGCGTG AGATCGATCA GATCACTGAC CGCGGTACCG CTGCGGAGCG TTCGGCGCTG TTCTGGCGCT GGACCATGGG CTTCAACGCC ACGATGGAGT CCATCCACCG GTGGGGTTAC TGGTTCGCCA TCCTCTGCGT GATTACGGGT GGCATCGGTA TCCTGCTGAC CGGCACCGTG GTTGAGAACT GGTACCTGTG GGGTGTCCAC CACGGCATTG CCCCCGAGTA TCCGGAGTTC TTCACACCGG CAGTGGATCC GGCAGCAGGG GGGACGGAGT GA
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Protein sequence | MAEYQNIFTR VQVRGPTDPG VELPAADWPR TKGSTHSWLL GKIGDAQVGP IYLGTTGVMS ILFGLLSIVI IGMNMLASVD WSPIEWIRQF FWVALEPPPP EYGLSLPPLN DGGWWLIAGF TLTLSILLWW VRTYNRARAL GLGTHVAWAF AAAIFLFLAI GFIWPVLMGS WAKSVPFGIF PHLDWTTAFS LRYGNLYYNP FHMLSIVFLF GSALLFAMHG ATILAAGRYN AEREIDQITD RGTAAERSAL FWRWTMGFNA TMESIHRWGY WFAILCVITG GIGILLTGTV VENWYLWGVH HGIAPEYPEF FTPAVDPAAG GTE
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