Gene Hhal_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1602 
Symbol 
ID4709663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1743037 
End bp1744254 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID639856067 
Productgeranylgeranyl reductase 
Protein accessionYP_001003168 
Protein GI121998381 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family
[TIGR02023] geranylgeranyl reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.157827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGA ACCATTCGCA GAACGCCGAG CGCTTCGATG TCGCCGTGGT CGGTGGTGGC 
CCTGCAGGTG CTACCGCGGC CCGCCATCTC GCCCAGCAGG GGCACGAGGT ACTGCTCCTC
GATCGCCCCG GCCGTATTAA ACCGTGTGGC GGTGCGATCC CGCCGCGGGC CGTGCAGGAC
TTCGAGATCC CGGACGACAT GATCTGCGCG ACAGTGGGCT CCGCCCGCAT GGTCTCGCCG
TCGGATCGCC ACGTGGACAT GCCGATCCAG GACGGGTATG TCGGCATGGT CGATCGCGAG
GTATTTGATG AGTGGCTGCG CAGCCGGGCT GCCGAAGCGG GCGCCCAACG TCGCGATGCC
ACGTTCAAGC ACCTTGAAGA AGGCGACGGC GGCGTGTATA TCCGCTATGC CCAAGGCCGG
GGCGGCGCCG ACGCCGAAAC CCGGCAGGTC TGGGCGCGGG TGGTGATCGG AGCGGATGGC
GCCAACTCCG CCGTCGGGCG CCAGGCCATC GAGGGCGCTA CCGAGATCCC CCAGGTCGCG
GCCTACCATG AGATTATCGA GGCCCCAGCC GCCGGCGAGG ACGACCGCTT CGACCCCCGG
CGGGCGGATG TTTACTACCG CGGCTCGATC TCACCGGATT TCTACGGCTG GATCTTCCCC
CACGGCGACA CCGTCAGTGT CGGCGCCGGC AGCGCGGTCA AGGGGTTCTC CCTGCGCTCT
GCGGTGGAGA AGCTGCGTCA AGACGCCGGA CTCGACCAAG CGAAGACTCT GCGCCGCGAA
GGGGCACCCA TCCCTATGCA CCCCCTCAAG CGCTGGGACA ATGGTCGAAA CGTGGTCCTG
GCGGGGGACG CCGCCGGTAC GGTGGCCCCA GCCTCCGGCG AGGGGATCTA CTACGCCATG
GTCGGCGGCC AGTATGCTGC CGAGGCCGTG GAGCGGGCCC TCGCCACCGG GGACGGCGCT
GCCCTCGCCC AAGCCGAGAA GGCCTTCACC CGGGATCACG GCCAGGTCTT CCGCGTTCTA
GGGGTGATGC AACGCTTCTG GTACACCAAC AATAACCGCC GGGAGCGCTT CGTGCGGATC
TGCGCCGACC CCGACGTTCA GGCCCTGACC TGGGACGCCT ACATGAACAA GCGCCTCGTT
CGCGCTCGTC CGCTCGCGCA CATGCGGATC TTCTTCAAGA ACATCGCTCA CCTGACCGGG
CTTGCCCCGG TCCGCTAA
 
Protein sequence
MLMNHSQNAE RFDVAVVGGG PAGATAARHL AQQGHEVLLL DRPGRIKPCG GAIPPRAVQD 
FEIPDDMICA TVGSARMVSP SDRHVDMPIQ DGYVGMVDRE VFDEWLRSRA AEAGAQRRDA
TFKHLEEGDG GVYIRYAQGR GGADAETRQV WARVVIGADG ANSAVGRQAI EGATEIPQVA
AYHEIIEAPA AGEDDRFDPR RADVYYRGSI SPDFYGWIFP HGDTVSVGAG SAVKGFSLRS
AVEKLRQDAG LDQAKTLRRE GAPIPMHPLK RWDNGRNVVL AGDAAGTVAP ASGEGIYYAM
VGGQYAAEAV ERALATGDGA ALAQAEKAFT RDHGQVFRVL GVMQRFWYTN NNRRERFVRI
CADPDVQALT WDAYMNKRLV RARPLAHMRI FFKNIAHLTG LAPVR