| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1602 |
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| Symbol | |
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| ID | 4709663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1743037 |
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| End bp | 1744254 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639856067 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001003168 |
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| Protein GI | 121998381 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.157827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATGA ACCATTCGCA GAACGCCGAG CGCTTCGATG TCGCCGTGGT CGGTGGTGGC
CCTGCAGGTG CTACCGCGGC CCGCCATCTC GCCCAGCAGG GGCACGAGGT ACTGCTCCTC
GATCGCCCCG GCCGTATTAA ACCGTGTGGC GGTGCGATCC CGCCGCGGGC CGTGCAGGAC
TTCGAGATCC CGGACGACAT GATCTGCGCG ACAGTGGGCT CCGCCCGCAT GGTCTCGCCG
TCGGATCGCC ACGTGGACAT GCCGATCCAG GACGGGTATG TCGGCATGGT CGATCGCGAG
GTATTTGATG AGTGGCTGCG CAGCCGGGCT GCCGAAGCGG GCGCCCAACG TCGCGATGCC
ACGTTCAAGC ACCTTGAAGA AGGCGACGGC GGCGTGTATA TCCGCTATGC CCAAGGCCGG
GGCGGCGCCG ACGCCGAAAC CCGGCAGGTC TGGGCGCGGG TGGTGATCGG AGCGGATGGC
GCCAACTCCG CCGTCGGGCG CCAGGCCATC GAGGGCGCTA CCGAGATCCC CCAGGTCGCG
GCCTACCATG AGATTATCGA GGCCCCAGCC GCCGGCGAGG ACGACCGCTT CGACCCCCGG
CGGGCGGATG TTTACTACCG CGGCTCGATC TCACCGGATT TCTACGGCTG GATCTTCCCC
CACGGCGACA CCGTCAGTGT CGGCGCCGGC AGCGCGGTCA AGGGGTTCTC CCTGCGCTCT
GCGGTGGAGA AGCTGCGTCA AGACGCCGGA CTCGACCAAG CGAAGACTCT GCGCCGCGAA
GGGGCACCCA TCCCTATGCA CCCCCTCAAG CGCTGGGACA ATGGTCGAAA CGTGGTCCTG
GCGGGGGACG CCGCCGGTAC GGTGGCCCCA GCCTCCGGCG AGGGGATCTA CTACGCCATG
GTCGGCGGCC AGTATGCTGC CGAGGCCGTG GAGCGGGCCC TCGCCACCGG GGACGGCGCT
GCCCTCGCCC AAGCCGAGAA GGCCTTCACC CGGGATCACG GCCAGGTCTT CCGCGTTCTA
GGGGTGATGC AACGCTTCTG GTACACCAAC AATAACCGCC GGGAGCGCTT CGTGCGGATC
TGCGCCGACC CCGACGTTCA GGCCCTGACC TGGGACGCCT ACATGAACAA GCGCCTCGTT
CGCGCTCGTC CGCTCGCGCA CATGCGGATC TTCTTCAAGA ACATCGCTCA CCTGACCGGG
CTTGCCCCGG TCCGCTAA
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| Protein sequence | MLMNHSQNAE RFDVAVVGGG PAGATAARHL AQQGHEVLLL DRPGRIKPCG GAIPPRAVQD
FEIPDDMICA TVGSARMVSP SDRHVDMPIQ DGYVGMVDRE VFDEWLRSRA AEAGAQRRDA
TFKHLEEGDG GVYIRYAQGR GGADAETRQV WARVVIGADG ANSAVGRQAI EGATEIPQVA
AYHEIIEAPA AGEDDRFDPR RADVYYRGSI SPDFYGWIFP HGDTVSVGAG SAVKGFSLRS
AVEKLRQDAG LDQAKTLRRE GAPIPMHPLK RWDNGRNVVL AGDAAGTVAP ASGEGIYYAM
VGGQYAAEAV ERALATGDGA ALAQAEKAFT RDHGQVFRVL GVMQRFWYTN NNRRERFVRI
CADPDVQALT WDAYMNKRLV RARPLAHMRI FFKNIAHLTG LAPVR
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