| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1536 |
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| Symbol | |
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| ID | 4709129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1670549 |
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| End bp | 1671172 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639856003 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001003105 |
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| Protein GI | 121998318 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.595422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCTG CGCGCGCGGC TACCGTCGCT GGGAGTCTGA TCGTCGCGGC CATCCTCTCT
CTTGTGGTTG GCTGTGGTGC CCCACCCTCC GCGCCAAGCA CGGTGGATGA CCCGGAAATC
GAGCAGTACG TCATCGGCCC CGGCGACACC CTGAACGTTC AGGTCTGGAA TAACCCCGAG
CTCTCAATCA GCGTTCCCGT CCGGCCGGAT GGGCAGATTT CGACTCCCCT GGTCGAGGAT
GTGCAAGCCA GCGGCGTTAC GCCCACCGAA TTGGCGCGGG TGATGGAGGA TGAGCTGAGC
CTCTACCTCC GCGATCCGGT CGTCACCGTG ATCGTGACCG GTTTTGCCGG ACCGTACGAT
CGCCAAGTGC GGGTCATCGG TCAGGCCACC GAGCCGCGCG CCCTGCAGTA CCGAGAGGAT
ATGTCCGTCA TGGATGTGAT GATTGAAGTG GGGGGGATGA CGGATGTTGC TGCCGGTAAT
CGCACGGTTC TGGTTCGCCA CGAGGACGGC GAGCGCAATC AGTATCGGGT TCGGCTTCAC
GACCTGATCA ATCGCGGTGA AATCGAGGCC AACATCGATA TCAAGCCCGG CGACGTGCTG
ATTATACCGG AACGATTTTT CTGA
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| Protein sequence | MEPARAATVA GSLIVAAILS LVVGCGAPPS APSTVDDPEI EQYVIGPGDT LNVQVWNNPE
LSISVPVRPD GQISTPLVED VQASGVTPTE LARVMEDELS LYLRDPVVTV IVTGFAGPYD
RQVRVIGQAT EPRALQYRED MSVMDVMIEV GGMTDVAAGN RTVLVRHEDG ERNQYRVRLH
DLINRGEIEA NIDIKPGDVL IIPERFF
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