Gene Hhal_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1502 
Symbol 
ID4709420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1624285 
End bp1625094 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID639855969 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_001003071 
Protein GI121998284 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAC ATCCCCGTTC TCTCACATGT TGGCTACTGG GGCTCGGCGC TCTACTCCTG 
ATCGCGAAAT CTACAGCGAC CTCGGCGTTT GCCAAGGATG ACCTAGCTGA CACGATCGAA
TCGATCACAC CTTCCGTAGT GGGGGTTGGC ACCCATGCCC CGACGCGCAA TCCCCGCGTT
GATTTCCGGG GGACCGGCTT TGTCATCGCA GACGGCAATG CAGTGCTGAC CAACCAACAC
GTCCTCCCCG AGACCCTGGA TGAAGAGCGC CGGGAAAGCC TGATCGTTCT GGTCGGTGAG
CCGGGGTCGC CCGATATACG CACCGCAGAG CCCGTGGCCC GTTCCAGGGC CCACGATCTG
GCCATCCTGC GCATCGAAGG CGATCCACTC CCGGCTCTGA ACATCGGCGA CCCGAACGAC
TTGCGCCCCG GCAACCAGGT GGCCTACACC GGCTTCCCGA TTGGCATGGT GATCGGTTTC
TATCCGGTGA CGCACACCGC GATCATCTCT GCGCGCACCC CCTTGGCATT GCCGGCACAA
CGAGACGATC AACTGGACCC CGGACAGGTG GCGCGGCTTC GCCGGGAAGA GCCGCCGATG
GTGTTCCAGC TCGACGGCAC CGCCTATCCG GGCAACAGCG GCAGCCCGGT TTACGACATC
AGCACCGGAC AGGTCTATGC CGTGCTAAAC AAGGTATTTG TTCAGGGTGG GCGTGAAGCG
GCCGTGCGCG AACCGAGTGG TATCAGCTAC GCGATTCCAC TCGATCTAGC CGAGTCGCTG
GTCGAAGAGT ACGAGCACGA ATTCCGTTAA
 
Protein sequence
MTRHPRSLTC WLLGLGALLL IAKSTATSAF AKDDLADTIE SITPSVVGVG THAPTRNPRV 
DFRGTGFVIA DGNAVLTNQH VLPETLDEER RESLIVLVGE PGSPDIRTAE PVARSRAHDL
AILRIEGDPL PALNIGDPND LRPGNQVAYT GFPIGMVIGF YPVTHTAIIS ARTPLALPAQ
RDDQLDPGQV ARLRREEPPM VFQLDGTAYP GNSGSPVYDI STGQVYAVLN KVFVQGGREA
AVREPSGISY AIPLDLAESL VEEYEHEFR