Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1502 |
Symbol | |
ID | 4709420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1624285 |
End bp | 1625094 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639855969 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_001003071 |
Protein GI | 121998284 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGAC ATCCCCGTTC TCTCACATGT TGGCTACTGG GGCTCGGCGC TCTACTCCTG ATCGCGAAAT CTACAGCGAC CTCGGCGTTT GCCAAGGATG ACCTAGCTGA CACGATCGAA TCGATCACAC CTTCCGTAGT GGGGGTTGGC ACCCATGCCC CGACGCGCAA TCCCCGCGTT GATTTCCGGG GGACCGGCTT TGTCATCGCA GACGGCAATG CAGTGCTGAC CAACCAACAC GTCCTCCCCG AGACCCTGGA TGAAGAGCGC CGGGAAAGCC TGATCGTTCT GGTCGGTGAG CCGGGGTCGC CCGATATACG CACCGCAGAG CCCGTGGCCC GTTCCAGGGC CCACGATCTG GCCATCCTGC GCATCGAAGG CGATCCACTC CCGGCTCTGA ACATCGGCGA CCCGAACGAC TTGCGCCCCG GCAACCAGGT GGCCTACACC GGCTTCCCGA TTGGCATGGT GATCGGTTTC TATCCGGTGA CGCACACCGC GATCATCTCT GCGCGCACCC CCTTGGCATT GCCGGCACAA CGAGACGATC AACTGGACCC CGGACAGGTG GCGCGGCTTC GCCGGGAAGA GCCGCCGATG GTGTTCCAGC TCGACGGCAC CGCCTATCCG GGCAACAGCG GCAGCCCGGT TTACGACATC AGCACCGGAC AGGTCTATGC CGTGCTAAAC AAGGTATTTG TTCAGGGTGG GCGTGAAGCG GCCGTGCGCG AACCGAGTGG TATCAGCTAC GCGATTCCAC TCGATCTAGC CGAGTCGCTG GTCGAAGAGT ACGAGCACGA ATTCCGTTAA
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Protein sequence | MTRHPRSLTC WLLGLGALLL IAKSTATSAF AKDDLADTIE SITPSVVGVG THAPTRNPRV DFRGTGFVIA DGNAVLTNQH VLPETLDEER RESLIVLVGE PGSPDIRTAE PVARSRAHDL AILRIEGDPL PALNIGDPND LRPGNQVAYT GFPIGMVIGF YPVTHTAIIS ARTPLALPAQ RDDQLDPGQV ARLRREEPPM VFQLDGTAYP GNSGSPVYDI STGQVYAVLN KVFVQGGREA AVREPSGISY AIPLDLAESL VEEYEHEFR
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