| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1493 |
|---|
| Symbol | |
|---|
| ID | 4709148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1613414 |
|---|
| End bp | 1615195 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639855960 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001003062 |
|---|
| Protein GI | 121998275 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGT ACCGCGCACC GACTCGCGAT CTGCGTTTCG TCATCGAAGA ACTGATCGGC
CTGGAGCGTT TTTCCGGGCT GCAGGATCTG GAAGAGATCA CCCCGGATCT GCTGGAGGCG
GTCCTCGAGG AGGCCGATCG GCTGGCCAGT GAGGTTTGGG CTCCGCTGAA CCAGGTCGGC
GACCGCCAAG GGTGCCGGAT GGAGGGGGGC GAGATGCGTT TGCCCGAGGG CTTCACCGAG
GCCTACCAGG CGTTTGTCGA GGGGGGGTGG AACGGCATCA ACGCCCATCC GGAGCACGGC
GGCCAGGGAT TGCCCGAGGT CGTCGCTACG GCGACCCAAG AGATGTGGCA CGGCGCCAAT
ATGGCGTTGG CCCTGGCCCC CATGCTCTCG GCGGGGGCGA CCGAACTGCT CCACCGCCAC
GGGGACGAGG CCCTGCGCGC TCGCTATCTG GGCAAGCTGG TCAGCGGGGA GTGGACCGGT
ACCATGGACC TGACCGAGCC CCAGGCCGGT TCCGATCTGG GGCAGGTCAA GTGCCGTGCG
GTACCGGACG GCGACGCCTA TCGCCTCTAC GGTCAGAAGA CCTACATCAC CTGGGGGGAG
CACGAGGCCG CCGAGAACAT CATCCACCTG GTCTTGGCCC GGACCCCGGA TGCCCCCGAG
GGGCATCGCG GCATCTCCTT GTTCCTGGTG CCCAAGTACC GGGTGGCCGA GGACGGTTCC
CTGGGGGTGC GCAACGACGT CCACTGCACC GCGCTGGAGC ACAAGCTCGG CATCCACGGT
TCGCCGACCT GCACCATCAG CTACGGGGAC AGCGAGGGGG CGGTGGGCTA CCTCGTCGGT
GAGCCCTGCC GCGGCCTCAA CCACATGTTC ACGATGATGA ACGAGGCGCG CCACAAGGTC
GGGGTACAAA GCGTCGGCGT GGCCGAGCGG GCCTATCAGC AGGCGCTGGC CTTCGCCCGG
GACCGAGTGC AGGGCCGCCG CCCCGGGGGC AAGGCGTCGG TGCCGATCCT CCAGCACCCG
GATGTCCGCC GCAGCCTGAT GACCATGCGG GCTCAGACCG AGGCCATGCG CGCGCTGGCG
CTGCTGACCG CGGCAGAGAT GGACGTTGCC GGGCACGCCG CCGACGCGGC GGCGCGCCAG
AGCGCCCAGC GCCGGGTGGA TCTGTTCACG CCGGTGGTCA AGGCGGTTGC CAGCGATCAG
GCCGTGGAGA TCACCTCGGT GGGCATTCAG GTCCACGGCG GTATGGGGTA TATCGAGGAG
GTGGAGGCCC CGCAGCTGTT GCGCGACGTG CGTGTTGCGG CGATTTACGA GGGCACCAAC
GGCATCCAGG CGCAAGACTT CACGCTGCGC AAGGTGCTCA AGGATGGCGG TGAAACCCTG
GAAGCGGTGC TCGGCGAGGC CGACGAAACC GTTGAGGCGT TGCGTCGCGA CCCCGACGTC
GCCCCCCTGG CCGACGGGCT GGCGGAGGGG GTCGCCACGC TGCGGGAGAG TACGGCGCGG
CTCCTGCAAG ACGGCGCCGA GGATCCGCTG GTGCCCTTGA CGGCGGCCAC ACCCTACCTG
ATGCAGGCGG GCTTGGTGCT GGGCGGCTGG CTGATGGGCC GGGCCGCCCT GGCGGCCCAG
GCGGGGATCC GTGCGGGCTC CGGCGACGCC GACTTCTATG CAGGCAAGCT GCACACCGCG
CGCTTCTACA TGCGCCACAT CCTGCCGCGG CTCCACGGCT ATACACCGGC CATCCGGGGT
GGCAGCGATG AGCTCGAGGC GATTGACGAC GGCCATTGGT GA
|
|---|
| Protein sequence | MSMYRAPTRD LRFVIEELIG LERFSGLQDL EEITPDLLEA VLEEADRLAS EVWAPLNQVG
DRQGCRMEGG EMRLPEGFTE AYQAFVEGGW NGINAHPEHG GQGLPEVVAT ATQEMWHGAN
MALALAPMLS AGATELLHRH GDEALRARYL GKLVSGEWTG TMDLTEPQAG SDLGQVKCRA
VPDGDAYRLY GQKTYITWGE HEAAENIIHL VLARTPDAPE GHRGISLFLV PKYRVAEDGS
LGVRNDVHCT ALEHKLGIHG SPTCTISYGD SEGAVGYLVG EPCRGLNHMF TMMNEARHKV
GVQSVGVAER AYQQALAFAR DRVQGRRPGG KASVPILQHP DVRRSLMTMR AQTEAMRALA
LLTAAEMDVA GHAADAAARQ SAQRRVDLFT PVVKAVASDQ AVEITSVGIQ VHGGMGYIEE
VEAPQLLRDV RVAAIYEGTN GIQAQDFTLR KVLKDGGETL EAVLGEADET VEALRRDPDV
APLADGLAEG VATLRESTAR LLQDGAEDPL VPLTAATPYL MQAGLVLGGW LMGRAALAAQ
AGIRAGSGDA DFYAGKLHTA RFYMRHILPR LHGYTPAIRG GSDELEAIDD GHW
|
|---|
| |