| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1478 |
|---|
| Symbol | |
|---|
| ID | 4709259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1599337 |
|---|
| End bp | 1600392 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639855945 |
|---|
| Product | heat-inducible transcription repressor HrcA |
|---|
| Protein accession | YP_001003047 |
|---|
| Protein GI | 121998260 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGC CGCACGATCT GGAGCTGGGC GACCGCGCGC GTATCCTGCT CCGCACGCTG
GTGCGTCGCT ACATCGACAG CGGCAGACCG GTCGGCTCGC GGAGCCTTGC CCGCGATGCG
GGGCTCTCCG TTAGCCCGGC GACCATCCGC AACGTCATGG CCGATCTCGA AGAGCTCGGG
TACCTGGTTG CGCCGCACAC CTCGGCCGGG CGGGTGCCCA CCGACCGCGG CTTGCGCTTC
TATGTTGACT GCCTGTTGCA GGTGCAGCCC ATCGGGGGGG ATACCGTCGA GCGGCTGCGC
CAGCGCCTGG CCCGTGACCG GGACGAGGGC GCGGAAGAGC TAGCGGACTC CGCCTCGGAT
CTGCTCTCGC AGCTGACCCG CCTGGCCGGG GTCGTGACTC TGCCGCGCTG CGACTGGGCG
GTACTGCGCC ACGTGGAGTT CCTGCCTTTA TCCGATTGCC GAGTGCTGGC GATCCTGGTG
ATCAACGAAC GGGATGTGCA GAATCGCGTC ATTCGTACCG AGCGCGATTT CTCCGAAGCG
GAGCTTCAGC GCATCGCCAA CTACCTCAAT GCCGAGTTCG CCGGTTTGGA GCTGCCGCGG
GTGCGCCAAA GCCTGCTGGC GGCCATGCAG GCGGATCAAC AGCGGCTCGA TGAGTTGATG
CGCTCGGCGG TGGAGGTCGG CGAGAAGGCC CTGGCCGAAG AGCAGGATGA CGAGGGCTAC
GTCGTGGCCG GCCAGACCAA CCTGATGGAG TTTGAAGAGC TCTCCGATGT CGATCGGCTG
CGACAGCTGT TCGAGGCTTT CACGCAGAAG CGCGATATCC TGCATCTCCT CGATCGCTGT
GCACGGGCCG ACGGTGTCCA GATCTACATC GGCCAGGAGG CCGGTTACGA GGTCTTTGAC
GGCCTCTCGC TGGTGACCGC GCGCTACGGG GTCGCCGGCG AAGCCGCCGG GGTGCTCGGT
GTCATCGGTC CGACCCGCAT GGCCTACGAT CGGATCATCC CGATCGTCGA TGTCACCGCC
CGTTTGGTGG GGTCGGCCTT GAATCCGCCC CGTTAG
|
|---|
| Protein sequence | MSPPHDLELG DRARILLRTL VRRYIDSGRP VGSRSLARDA GLSVSPATIR NVMADLEELG
YLVAPHTSAG RVPTDRGLRF YVDCLLQVQP IGGDTVERLR QRLARDRDEG AEELADSASD
LLSQLTRLAG VVTLPRCDWA VLRHVEFLPL SDCRVLAILV INERDVQNRV IRTERDFSEA
ELQRIANYLN AEFAGLELPR VRQSLLAAMQ ADQQRLDELM RSAVEVGEKA LAEEQDDEGY
VVAGQTNLME FEELSDVDRL RQLFEAFTQK RDILHLLDRC ARADGVQIYI GQEAGYEVFD
GLSLVTARYG VAGEAAGVLG VIGPTRMAYD RIIPIVDVTA RLVGSALNPP R
|
|---|
| |